RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 SOCS2O14508 198 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 EI24O14681 340 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 UPK3AO75631 287 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 ALPLP05186 524 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 QDPRP09417 244 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 COX5AP20674 150 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 PAICSP22234 425 aaKnown RBP12.42□□□□□ -0.42
CMTM1-201ENST00000328020 CRABP1P29762 137 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 GRK5P34947 590 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 UGT2B10P36537 528 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 GIPRP48546 466 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 CRISP1P54107 249 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 SLC34A1Q06495 639 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 RIPK1Q13546 671 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 GINS1Q14691 196 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-201ENST00000328020 P2RY8Q86VZ1 359 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
CMTM1-201ENST00000328020 PACRGLQ8N7B6 248 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 SYT14Q8NB59 555 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 KCNK17Q96T54 332 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 VCX3BQ9H321 246 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 RRP15Q9Y3B9 282 aaKnown RBP12.42□□□□□ -0.42
CMTM1-201ENST00000328020 ICE1Q9Y2F5 2266 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 COL12A1Q99715 3063 aa12.42□□□□□ -0.42
CMTM1-201ENST00000328020 ZNF99A8MXY4 864 aaPredicted RBP12.41□□□□□ -0.42
CMTM1-201ENST00000328020 BHLHE40O14503 412 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 MGRN1O60291 552 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 ZNF3P17036 446 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 IGHV1-2P23083 117 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 PAX7P23759 505 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 HCFC1P51610 2035 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 TFF3Q07654 80 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 FAM27E3Q08E93 113 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 CDSNQ15517 529 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 HIST3H3Q16695 136 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 PGGHGQ32M88 737 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 KLHL24Q6TFL4 600 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 STAC2Q6ZMT1 411 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 C17orf78Q8N4C9 275 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 ZNF433Q8N7K0 673 aaPredicted RBP12.41□□□□□ -0.42
CMTM1-201ENST00000328020 OR8D4Q8NGM9 314 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 HDAC2Q92769 488 aaKnown RBP12.41□□□□□ -0.42
CMTM1-201ENST00000328020 MCHR2Q969V1 340 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 RASD2Q96D21 266 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 MUCL1Q96DR8 90 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 SLC25A19Q9HC21 320 aa12.41□□□□□ -0.42
CMTM1-201ENST00000328020 MOV10Q9HCE1 1003 aaKnown RBP12.41□□□□□ -0.42
CMTM1-201ENST00000328020 SLC22A23A1A5C7 686 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 TUBAL3A6NHL2 446 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 CASQ2O14958 399 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 DHHO43323 396 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 LYZL6O75951 148 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 FARS2O95363 451 aaKnown RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 TP53P04637 393 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 HOXB1P14653 301 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 NPR2P20594 1047 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 EDNRAP25101 427 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 CDK5Q00535 292 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 RUNX1T1Q06455 604 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 NPRL3Q12980 569 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 MESTQ5EB52 335 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 SLC35F1Q5T1Q4 408 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 LEG1Q6P5S2 330 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 OR52E2Q8NGJ4 325 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 OR4K13Q8NH42 304 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 HSD17B8Q92506 261 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 ACTR6Q9GZN1 396 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 RIBC2Q9H4K1 309 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 CMC2Q9NRP2 79 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 TMEFF2Q9UIK5 374 aaPredicted RBP12.4□□□□□ -0.42
CMTM1-201ENST00000328020 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
CMTM1-201ENST00000328020 ADGRG4Q8IZF6 3080 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 CASKO14936 926 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 MITFO75030 526 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 KHDRBS3O75525 346 aaKnown RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 WNT11O96014 354 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 ITGA5P08648 1049 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 IGFBP1P08833 259 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 RNF224P0DH78 156 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 ZNF133P52736 654 aaPredicted RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 UBE2NP61088 152 aaKnown RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 ARF1P84077 181 aaKnown RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 PTGES3Q15185 160 aaKnown RBP12.39□□□□□ -0.43
CMTM1-201ENST00000328020 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 NRN1LQ496H8 165 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
CMTM1-201ENST00000328020 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms