RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TBC1D3FA6NER0 549 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MFSD2BA6NFX1 497 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3LB9A6J9 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PEX10O60683 326 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NFATC1O95644 943 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3HP0C7X1 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 DPEP1P16444 411 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 DAP3P51398 398 aaKnown RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GBX1Q14549 363 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ADIRFQ15847 76 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TPGS2Q68CL5 300 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3GQ6DHY5 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3CQ6IPX1 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3Q8IZP1 549 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR9A2Q8NGT5 310 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GOT1L1Q8NHS2 421 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CA5BP1Q8WTZ4 195 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SLC22A7Q9Y694 548 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 P2RX1P51575 399 aa6.52□□□□□ -1.36
SMC1A-201ENST00000322213 PIANPQ8IYJ0 282 aa6.52□□□□□ -1.36
SMC1A-201ENST00000322213 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.36
SMC1A-201ENST00000322213 RBP7Q96R05 134 aa6.52□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF230Q9UIE0 474 aaPredicted RBP6.52□□□□□ -1.36
SMC1A-201ENST00000322213 V9GYS6 101 aa6.52□□□□□ -1.36
SMC1A-201ENST00000322213 FXYD1O00168 92 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF593O00488 134 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SOX1O00570 391 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 PQBP1O60828 265 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 STATHP02808 62 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TK1P04183 234 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SMPD1P17405 629 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CRABP1P29762 137 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC6A11P48066 632 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 FXYD4P59646 89 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ACSM1Q08AH1 577 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR1Q1Q15612 314 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 GGNBP1Q5YKI7 109 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SPTSSAQ969W0 71 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CXorf58Q96LI9 332 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 RHNO1Q9BSD3 238 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 MTIF3Q9H2K0 278 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 MVB12BQ9H7P6 319 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM100Q9NV29 134 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 RAB22AQ9UL26 194 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 IER3IP1Q9Y5U9 82 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 MDFIC2A0A1B0GVS7 189 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 KDM4FA0A1W2PPD8 638 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SERPINA7P05543 415 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 RAC2P15153 192 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 FAM74A1Q5RGS3 127 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 LCN10Q6JVE6 187 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 OR51Q1Q8NH59 317 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 IGSF8Q969P0 613 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 RAB7BQ96AH8 199 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM121BQ9BXQ6 578 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM231Q9H6L2 316 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC25A37Q9NYZ2 338 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 C5AR2Q9P296 337 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 HHLA2Q9UM44 414 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 YY2O15391 372 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 IQCF3P0C7M6 154 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 GABRA2P47869 451 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TLE1Q04724 770 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 LGALSLQ3ZCW2 172 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 Q6ZSR9 355 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 Q6ZVU0 165 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC35D2Q76EJ3 337 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CCNL2Q96S94 520 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF426Q9BUY5 554 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 hCG_1809904A0A1W2PP81 198 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 A0A1W2PR64 198 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 A0A1W2PRV1 198 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 EIF1BO60739 113 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SLC2A1P11166 492 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM11P17152 192 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 DDTP30046 118 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 EIF1P41567 113 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF157P51786 506 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CDK5Q00535 292 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ATPAF1Q5TC12 328 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 LCTLQ6UWM7 567 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 DEFB128Q7Z7B8 93 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 SERINC5Q86VE9 423 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 HGDQ93099 445 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TRMT2BQ96GJ1 504 aaKnown RBP6.52□□□□□ -1.37
SMC1A-201ENST00000322213 MEGF10Q96KG7 1140 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 PTGES2Q9H7Z7 377 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 FN3KRPQ9HA64 309 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 ELOVL2Q9NXB9 296 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 TREM2Q9NZC2 230 aa6.52□□□□□ -1.37
SMC1A-201ENST00000322213 CACNG4Q9UBN1 327 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms