RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 FPR3P25089 353 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ACVR1BP36896 505 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 GSSP48637 474 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 CSNK1A1P48729 337 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 HMGA2P52926 109 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 CLRN1P58418 232 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TUBA1BP68363 451 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TUBA4AP68366 448 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ARF1P84077 181 aaKnown RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 SORDQ00796 357 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 FMODQ06828 376 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 DBPQ10586 325 aaPredicted RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 P2RY6Q15077 328 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TAB1Q15750 504 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ZSCAN26Q16670 478 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 MICAQ29983 383 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 CEACAM16Q2WEN9 425 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 HIKESHIQ53FT3 197 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ZNF770Q6IQ21 691 aaPredicted RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 HMBOX1Q6NT76 420 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 C1orf94Q6P1W5 598 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TUBA1AQ71U36 451 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ZBTB46Q86UZ6 589 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 C20orf196Q8IYI0 205 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ZNF295-AS1Q8N0V1 137 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 POMGNT2Q8NAT1 580 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ACBD4Q8NC06 268 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PAPD5Q8NDF8 572 aaKnown RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 OR10G2Q8NGC3 310 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 OR52N5Q8NH56 324 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 GIPC3Q8TF64 312 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 LRTOMTQ8WZ04 291 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 HDAC2Q92769 488 aaKnown RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 NINJ1Q92982 152 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 POP5Q969H6 163 aaKnown RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 RASD2Q96D21 266 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 SAMD8Q96LT4 415 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 Q96M85 177 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 C1QTNF6Q9BXI9 259 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 ULBP2Q9BZM5 246 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 SEMA6AQ9H2E6 1030 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 EGLN3Q9H6Z9 239 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 NTN4Q9HB63 628 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 CRLF2Q9HC73 371 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 GPR35Q9HC97 309 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 PDP1Q9P0J1 537 aaPredicted RBP6.91□□□□□ -1.3
CDC42-201ENST00000315554 DNAJB9Q9UBS3 223 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 NDRG3Q9UGV2 375 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 SIGLEC7Q9Y286 467 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 GPR52Q9Y2T5 361 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 AP4S1Q9Y587 144 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 N6AMT1Q9Y5N5 214 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 IER3IP1Q9Y5U9 82 aa6.91□□□□□ -1.3
CDC42-201ENST00000315554 TEX13CA0A0J9YWL9 993 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 HTR3EA5X5Y0 456 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 TRIM64A6NGJ6 449 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 TRIM64BA6NI03 449 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 CYSRT1A8MQ03 144 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 SOCS2O14508 198 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 IMPA2O14732 288 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 ENTPD5O75356 428 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 TRMUO75648 421 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 NDUFB2O95178 105 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 SOX14O95416 240 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 SLC2A10O95528 541 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 IGHG1P01857 330 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 PGA4P0DJD7 388 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 PGA3P0DJD8 388 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 EPXP11678 715 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 ACADSP16219 412 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 MPGP29372 298 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 IFNGR2P38484 337 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 DAP3P51398 398 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 ACTR3P61158 418 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 RPL27P61353 136 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 TSPAN31Q12999 210 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 GABRA6Q16445 453 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 CLEC12AQ5QGZ9 265 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 SMARCD3Q6STE5 483 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 YTHDF3Q7Z739 585 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 NOXO1Q8NFA2 376 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 STEAP2Q8NFT2 490 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 OR8D4Q8NGM9 314 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 OR1K1Q8NGR3 316 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 OR6X1Q8NH79 312 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 LILRB1Q8NHL6 650 aaPredicted RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 NSMAFQ92636 917 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 TMEM54Q969K7 222 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 ZNF566Q969W8 418 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 SLC25A44Q96H78 314 aaPredicted RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 ADAD1Q96M93 576 aaKnown RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 FOXN4Q96NZ1 517 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.31
CDC42-201ENST00000315554 FEVQ99581 238 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 PLA2G12AQ9BZM1 189 aa6.9□□□□□ -1.31
CDC42-201ENST00000315554 LINC00470Q9BZP3 86 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms