RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CT45A2Q5DJT8 189 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 CT45A1Q5HYN5 189 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF852Q6ZMS4 543 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
CLCN6-201ENST00000312413 LMNTD1Q8N9Z9 388 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 CT45A3Q8NHU0 189 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 CHST8Q9H2A9 424 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
CLCN6-201ENST00000312413 DOK2O60496 412 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 MISPQ8IVT2 679 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 OR52I2Q8NH67 350 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 RNF167Q9H6Y7 350 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 GPR160Q9UJ42 338 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 CORINQ9Y5Q5 1042 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 JTBO76095 146 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 OLFM2O95897 454 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 CD80P33681 288 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 CDC20Q12834 499 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 GLIPR1L1Q6UWM5 242 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 ACOT7LQ6ZUV0 252 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 APH1BQ8WW43 257 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 TM4SF18Q96CE8 201 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 SEH1LQ96EE3 360 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 TEX37Q96LM6 180 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 SCPEP1Q9HB40 452 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 ASIC5Q9NY37 505 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 IHHQ14623 411 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 KIRREL1Q96J84 757 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 SPACA1Q9HBV2 294 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 IL23AQ9NPF7 189 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 CSAG2Q9Y5P2 127 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 UMAD1C9J7I0 102 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 LGALS8O00214 317 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 ANGPTL7O43827 346 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
CLCN6-201ENST00000312413 TMEM71Q6P5X7 295 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
CLCN6-201ENST00000312413 PARP12Q9H0J9 701 aaKnown RBP12.62□□□□□ -0.39
CLCN6-201ENST00000312413 NDRG4Q9ULP0 352 aaKnown RBP12.62□□□□□ -0.39
CLCN6-201ENST00000312413 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 METTL15P1P0C7V9 234 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 BIDP55957 195 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 AAED1Q7RTV5 226 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 CDCA4Q9BXL8 241 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ERVMER34-1Q9H9K5 563 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 HEYLQ9NQ87 328 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 B3GALT5Q9Y2C3 310 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TRAF3IP2O43734 574 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 GPX5O75715 221 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 GLSO94925 669 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 EDN1P05305 212 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 GABREP78334 506 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 REEP5Q00765 189 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 CTU2Q2VPK5 515 aaKnown RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ZBTB44Q8NCP5 570 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TMEM174Q8WUU8 243 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 MBOAT4Q96T53 435 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ULBP3Q9BZM4 244 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 FITM1A5D6W6 292 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 OR6C68A6NDL8 312 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 SELENOFO60613 162 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 DRD1P21728 446 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 DLEU7Q6UYE1 221 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLCN6-201ENST00000312413 DYNC2LI1Q8TCX1 351 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 NDUFB11Q9NX14 153 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 GABRB1P18505 474 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 SLC35A1P78382 337 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 SAXO2Q658L1 398 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 OR6K3Q8NGY3 331 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 MED9Q9NWA0 146 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 PCDHB10Q9UN67 800 aa12.61□□□□□ -0.39
CLCN6-201ENST00000312413 TO15178 435 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 SBK2P0C263 348 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 DGCR2P98153 550 aa12.6□□□□□ -0.39
CLCN6-201ENST00000312413 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 SOWAHCQ53LP3 525 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-201ENST00000312413 IL34Q6ZMJ4 242 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms