RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SH2D7A6NKC9 451 aaPredicted RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 ATG12O94817 140 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 TEKQ02763 1124 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 MEF2DQ14814 521 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ZNF425Q6IV72 752 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 CBLL1Q75N03 491 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 CDRT4Q8N9R6 151 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ZNF566Q969W8 418 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 NMES1Q9C002 83 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 COA3Q9Y2R0 106 aaPredicted RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 GJE1A6NN92 205 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 CNIH1O95406 144 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ZNF728P0DKX0 622 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SRMP19623 302 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ARNTP27540 789 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 KRTDAPP60985 99 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SNRPNP63162 240 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 CTBSQ01459 385 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ANKRD16Q6P6B7 361 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 TMEM200AQ86VY9 491 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 THNSL2Q86YJ6 484 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 OR6V1Q8N148 313 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 OR4F4Q96R69 305 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 A0A1W2PR80 420 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 TAPBPO15533 448 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 CSNK1EP49674 416 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 OR1D5P58170 312 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 PMP22Q01453 160 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 IAH1Q2TAA2 248 aaPredicted RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 SMUG1Q53HV7 270 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 RANBP10Q6VN20 620 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 FAM71CQ8NEG0 241 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 OR1E3Q8WZA6 343 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 LURAP1Q96LR2 239 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ZMAT5Q9UDW3 170 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 FAM166BA8MTA8 275 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 METTL12A8MUP2 240 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 OR2F2O95006 317 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 PTHLHP12272 177 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 RAB30Q15771 203 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 MED25Q71SY5 747 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 KIAA0907Q7Z7F0 614 aaPredicted RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 GRAMD2AQ8IUY3 354 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 FIBINQ8TAL6 211 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 SPANXN5Q5MJ07 72 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 KDM4DQ6B0I6 523 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ISG20L2Q9H9L3 353 aaKnown RBP11.66□□□□□ -0.54
USP38-201ENST00000307017 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 LAP3P28838 519 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SLC19A1P41440 591 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 EPHA5P54756 1037 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ACSM1Q08AH1 577 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 HACD4Q5VWC8 232 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SLC46A3Q7Z3Q1 461 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 LACC1Q8IV20 430 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SLC35F3Q8IY50 421 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 ASB11Q8WXH4 323 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 PELI2Q9HAT8 420 aa11.66□□□□□ -0.54
USP38-201ENST00000307017 SIRPB1O00241 398 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 IGHV3-13P01766 116 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 IGHV3-7P01780 117 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 EIF4EP06730 217 aaKnown RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 DLX5P56178 289 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 PLA1AQ53H76 456 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 H3F3CQ6NXT2 135 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 GLIPR1L1Q6UWM5 242 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 TRIB3Q96RU7 358 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 UTS2O95399 124 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 ELAVL4P26378 380 aaKnown RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 WBP2NLQ6ICG8 309 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 SERINC5Q86VE9 423 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 RHOXF1Q8NHV9 184 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 MED9Q9NWA0 146 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 PLEKHB1Q9UF11 243 aaPredicted RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 C3P01024 1663 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 KCNK5O95279 499 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 CD63P08962 238 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 OPRM1P35372 400 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 CEBPDP49716 269 aaPredicted RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 DUSP6Q16828 381 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 ANGPTL5Q86XS5 388 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 TMEM99Q8N816 258 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 TSSK2Q96PF2 358 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 LYSMD1Q96S90 227 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 AUNIPQ9H7T9 357 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 ARNT2Q9HBZ2 717 aa11.65□□□□□ -0.54
USP38-201ENST00000307017 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.54
USP38-201ENST00000307017 UBE2IP63279 158 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms