RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 FAHD1Q6P587 224 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 LRFN4Q6PJG9 635 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 TEX47Q8TBZ9 253 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 ALG12Q9BV10 488 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 SMURF2Q9HAU4 748 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 REV1Q9UBZ9 1251 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 DCHS2Q6V1P9 2916 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 APEHP13798 732 aaKnown RBP19.62■□□□□ 0.73
HOXD4-201ENST00000306324 PPP3CBP16298 524 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 POU1F1P28069 291 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 ARF1P84077 181 aaKnown RBP19.62■□□□□ 0.73
HOXD4-201ENST00000306324 FMODQ06828 376 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 HIST3H3Q16695 136 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 ALKBH2Q6NS38 261 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 C22orf34Q6ZV56 151 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 PQLC1Q8N2U9 271 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 OR1K1Q8NGR3 316 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 MCHR2Q969V1 340 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 RBP7Q96R05 134 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 GABARAPL1Q9H0R8 117 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 OR10A4Q9H209 315 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 SLC24A3Q9HC58 644 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 PAPOLBQ9NRJ5 636 aaKnown RBP19.62■□□□□ 0.73
HOXD4-201ENST00000306324 POFUT2Q9Y2G5 429 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 CELSR2Q9HCU4 2923 aa19.62■□□□□ 0.73
HOXD4-201ENST00000306324 ZNF99A8MXY4 864 aaPredicted RBP19.61■□□□□ 0.73
HOXD4-201ENST00000306324 ARPC3O15145 178 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 SEC14L2O76054 403 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 SLC2A10O95528 541 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 TXNDC12O95881 172 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 NR2C1P13056 603 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 OSMP13725 252 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 SH3BGRP55822 239 aaPredicted RBP19.61■□□□□ 0.73
HOXD4-201ENST00000306324 C1orf162Q8NEQ5 155 aaPredicted RBP19.61■□□□□ 0.73
HOXD4-201ENST00000306324 DNAJC9Q8WXX5 260 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 MUS81Q96NY9 551 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 KRT84Q9NSB2 600 aa19.61■□□□□ 0.73
HOXD4-201ENST00000306324 A0A096LPE4 126 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 A0A1W2PPZ6 126 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 A0A1W2PR80 420 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 PRSS37A4D1T9 235 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 OR5H1A6NKK0 313 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 BHLHE40O14503 412 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 DHHO43323 396 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 HOXC12P31275 282 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 HIKESHIQ53FT3 197 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 SLC35F1Q5T1Q4 408 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 ADCK1Q86TW2 530 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 JAZF1Q86VZ6 243 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 OR2T33Q8NG76 320 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 OR4K13Q8NH42 304 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 OR52N5Q8NH56 324 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 FNDC8Q8TC99 324 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 NSMAFQ92636 917 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 DACH2Q96NX9 599 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 CIB1Q99828 191 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 USB1Q9BQ65 265 aaKnown RBP19.6■□□□□ 0.73
HOXD4-201ENST00000306324 IMPA2O14732 288 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 CASKO14936 926 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 IDH3BO43837 385 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 EPXP11678 715 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 HIST1H1CP16403 213 aaKnown RBP19.6■□□□□ 0.73
HOXD4-201ENST00000306324 ELF3P78545 371 aaPredicted RBP19.6■□□□□ 0.73
HOXD4-201ENST00000306324 RCN1Q15293 331 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 TAB1Q15750 504 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 TIMM23BQ5SRD1 257 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 THEM4Q5T1C6 240 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 ANKRD16Q6P6B7 361 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 PTCHD4Q6ZW05 846 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 OR4Q3Q8NH05 313 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 FAM222BQ8WU58 562 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 HSD17B8Q92506 261 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 MUCL1Q96DR8 90 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 FOXB1Q99853 325 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 ZNF226Q9NYT6 803 aa19.6■□□□□ 0.73
HOXD4-201ENST00000306324 HEATR1Q9H583 2144 aaKnown RBP19.59■□□□□ 0.73
HOXD4-201ENST00000306324 SLC22A23A1A5C7 686 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 MITFO75030 526 aaPredicted RBP19.59■□□□□ 0.73
HOXD4-201ENST00000306324 THBDP07204 575 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 CDKN2AP42771 156 aaKnown RBP19.59■□□□□ 0.73
HOXD4-201ENST00000306324 ZNF84P51523 738 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 TBRG1Q3YBR2 411 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 KDM4DQ6B0I6 523 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 LEG1Q6P5S2 330 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 KLHL24Q6TFL4 600 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 ZNF813Q6ZN06 617 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 P2RY8Q86VZ1 359 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 WFDC8Q8IUA0 241 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 LNX2Q8N448 690 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 C17orf78Q8N4C9 275 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 IQCF1Q8N6M8 205 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 SDR9C7Q8NEX9 313 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 BCL2L2Q92843 193 aaPredicted RBP19.59■□□□□ 0.73
HOXD4-201ENST00000306324 NMD3Q96D46 503 aaKnown RBP19.59■□□□□ 0.73
HOXD4-201ENST00000306324 NMNAT3Q96T66 252 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 SYT4Q9H2B2 425 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 KCNN3Q9UGI6 736 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 BAIAP2Q9UQB8 552 aa19.59■□□□□ 0.73
HOXD4-201ENST00000306324 IGKV1D-43A0A0B4J1Z2 117 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 B4GALT1P15291 398 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms