RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MITFO75030 526 aaPredicted RBP21.54■■□□□ 1.04
HOXC9-201ENST00000303450 QDPRP09417 244 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 PEX19P40855 299 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 LCN6P62502 163 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 DAG1Q14118 895 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 SLC35F1Q5T1Q4 408 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 LRFN4Q6PJG9 635 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 ADCK1Q86TW2 530 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 JAZF1Q86VZ6 243 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 LNX2Q8N448 690 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 STEAP2Q8NFT2 490 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 FNDC8Q8TC99 324 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 MCHR2Q969V1 340 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 ENOPH1Q9UHY7 261 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 PRSS37A4D1T9 235 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 RAD51DO75771 328 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 HIST1H1CP16403 213 aaKnown RBP21.53■■□□□ 1.04
HOXC9-201ENST00000303450 CCKARP32238 428 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 SNTB1Q13884 538 aaKnown RBP21.53■■□□□ 1.04
HOXC9-201ENST00000303450 THEM4Q5T1C6 240 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 SLC27A4Q6P1M0 643 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 ZBTB49Q6ZSB9 765 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 OR4Q3Q8NH05 313 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 OR4K13Q8NH42 304 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 ZNF837Q96EG3 531 aaPredicted RBP21.53■■□□□ 1.04
HOXC9-201ENST00000303450 ACTR6Q9GZN1 396 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 TMEFF2Q9UIK5 374 aaPredicted RBP21.53■■□□□ 1.04
HOXC9-201ENST00000303450 ORC6Q9Y5N6 252 aa21.53■■□□□ 1.04
HOXC9-201ENST00000303450 ADGRG4Q8IZF6 3080 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 AHCYL1O43865 530 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 GIPRP48546 466 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 ALDH3A2P51648 485 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 CRISP1P54107 249 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 SH3BGRP55822 239 aaPredicted RBP21.52■■□□□ 1.04
HOXC9-201ENST00000303450 ESRRGP62508 458 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 GINS1Q14691 196 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 TRIP10Q15642 601 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 PGGHGQ32M88 737 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 OR7E24Q6IFN5 339 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 IQCF1Q8N6M8 205 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 S100PBPQ96BU1 408 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 USE1Q9NZ43 259 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 NDRG3Q9UGV2 375 aa21.52■■□□□ 1.04
HOXC9-201ENST00000303450 SLC22A23A1A5C7 686 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 TUBAL3A6NHL2 446 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 DHHO43323 396 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 ALPLP05186 524 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 CDKN2AP42771 156 aaKnown RBP21.51■■□□□ 1.03
HOXC9-201ENST00000303450 ARF1P84077 181 aaKnown RBP21.51■■□□□ 1.03
HOXC9-201ENST00000303450 FMODQ06828 376 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 PTCHD4Q6ZW05 846 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 OR52E2Q8NGJ4 325 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 OR10A4Q9H209 315 aa21.51■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF99A8MXY4 864 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 SLC2A10O95528 541 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 IGFBP2P18065 325 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 STK11Q15831 433 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 GABRA6Q16445 453 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 LEG1Q6P5S2 330 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 MEX3BQ6ZN04 569 aaKnown RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 C1orf162Q8NEQ5 155 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 NMD3Q96D46 503 aaKnown RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 NMNAT3Q96T66 252 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 USB1Q9BQ65 265 aaKnown RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 TEX12Q9BXU0 123 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 SYT4Q9H2B2 425 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 VSX1Q9NZR4 365 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 PLEKHB1Q9UF11 243 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 RENP00797 406 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 PPP3CBP16298 524 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF84P51523 738 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 C10orf128Q5T292 105 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 SP5Q6BEB4 398 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 DMRTC2Q8IXT2 367 aaPredicted RBP21.5■■□□□ 1.03
HOXC9-201ENST00000303450 SDR9C7Q8NEX9 313 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 OR1K1Q8NGR3 316 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 LINC01560Q8TB33 94 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 NSMAFQ92636 917 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 MUS81Q96NY9 551 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 SLC29A1Q99808 456 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 MED18Q9BUE0 208 aa21.5■■□□□ 1.03
HOXC9-201ENST00000303450 UTP20O75691 2785 aaKnown RBP21.49■■□□□ 1.03
HOXC9-201ENST00000303450 IFNGP01579 166 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 HOXC12P31275 282 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 GRK5P34947 590 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 KIR2DL3P43628 341 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 ZNF133P52736 654 aaPredicted RBP21.49■■□□□ 1.03
HOXC9-201ENST00000303450 RAD23AP54725 363 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 CDK5Q00535 292 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 PTGES3Q15185 160 aaKnown RBP21.49■■□□□ 1.03
HOXC9-201ENST00000303450 LRRC36Q1X8D7 754 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 TMEM236Q5W0B7 351 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 ACSM5Q6NUN0 579 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 ANKRD16Q6P6B7 361 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 WFIKKN1Q96NZ8 548 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 SNX18Q96RF0 628 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 FOXB1Q99853 325 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 RIBC2Q9H4K1 309 aa21.49■■□□□ 1.03
HOXC9-201ENST00000303450 RNPEPL1Q9HAU8 725 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms