RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 OR2T27Q8NH04 317 aa19.85■□□□□ 0.77
TPM4-201ENST00000300933 LINC00052Q96N35 136 aa19.85■□□□□ 0.77
TPM4-201ENST00000300933 OR14A2Q96R54 314 aa19.85■□□□□ 0.77
TPM4-201ENST00000300933 LAT2Q9GZY6 243 aa19.85■□□□□ 0.77
TPM4-201ENST00000300933 SPATA2Q9UM82 520 aa19.85■□□□□ 0.77
TPM4-201ENST00000300933 A0A1B0GTH9 108 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ARPC3O15145 178 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ICAM2P13598 275 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 F8A1P23610 371 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 EDNRAP25101 427 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 SELENOPP49908 381 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 GDI2P50395 445 aaKnown RBP19.84■□□□□ 0.77
TPM4-201ENST00000300933 NKAIN1Q4KMZ8 207 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 LINC01590Q5TEZ4 76 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 SFXN4Q6P4A7 337 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ARSKQ6UWY0 536 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 TSPAN32Q96QS1 320 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 GSX2Q9BZM3 304 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 PPA2Q9H2U2 334 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 GRHPRQ9UBQ7 328 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 NCOR1O75376 2440 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 TMEM72A0PK05 275 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ANKRD61A6NGH8 418 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 HPXP02790 462 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 MTNR1BP49286 362 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ACTC1P68032 377 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ACTA1P68133 377 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 RNF4P78317 190 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 SIRPAP78324 504 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ADGRG3Q86Y34 549 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 LRRC75AQ8NAA5 344 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ATOH1Q92858 354 aaPredicted RBP19.84■□□□□ 0.77
TPM4-201ENST00000300933 NMNAT2Q9BZQ4 307 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 SLC19A3Q9BZV2 496 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 ADAM19Q9H013 955 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 MRPL15Q9P015 296 aaKnown RBP19.84■□□□□ 0.77
TPM4-201ENST00000300933 SEMA5BQ9P283 1151 aa19.84■□□□□ 0.77
TPM4-201ENST00000300933 MEIKINA0A087WXM9 373 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 SCRG1O75711 98 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 H2AFB2P0C5Z0 115 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 ANKRD34CP0C6C1 535 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 MESTQ5EB52 335 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 SYT4Q9H2B2 425 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 SDK2Q58EX2 2172 aa19.83■□□□□ 0.77
TPM4-201ENST00000300933 IGHV5-10-1A0A0J9YXX1 117 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 TEX46H3BTG2 121 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 HIST1H2ABP04908 130 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 HEXBP07686 556 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 ACSM4P0C7M7 580 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 NPR2P20594 1047 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 ZP1P60852 638 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 LGALS3BPQ08380 585 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 POU4F2Q12837 409 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 ODF4Q2M2E3 257 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 RHBDD2Q6NTF9 364 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 HIST3H2AQ7L7L0 130 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 OR6V1Q8N148 313 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 SAP25Q8TEE9 199 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 HIST1H2ACQ93077 130 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 MS4A7Q9GZW8 240 aaPredicted RBP19.83■□□□□ 0.76
TPM4-201ENST00000300933 EXOSC3Q9NQT5 275 aaKnown RBP19.83■□□□□ 0.76
TPM4-201ENST00000300933 RABL2BQ9UNT1 228 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 GPR179Q6PRD1 2367 aa19.83■□□□□ 0.76
TPM4-201ENST00000300933 RGS11O94810 467 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 OR8G3PP0DMU2 310 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 NANOS3P60323 173 aaKnown RBP19.82■□□□□ 0.76
TPM4-201ENST00000300933 PRSS45Q7RTY3 260 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 HGDQ93099 445 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 GAREM1Q9H706 876 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 WDR76Q9H967 626 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 SHISA8B8ZZ34 492 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 ALG1L2C9J202 215 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 SULT1A3P0DMM9 295 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 SULT1A4P0DMN0 295 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 GBX2P52951 348 aaPredicted RBP19.82■□□□□ 0.76
TPM4-201ENST00000300933 NRG3P56975 720 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 IKZF1Q13422 519 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 CDK5R1Q15078 307 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 APCDD1LQ8NCL9 501 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 OR4D9Q8NGE8 314 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 YIPF5Q969M3 257 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 OCIAD1Q9NX40 245 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 PTTG3PQ9NZH4 202 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 FLVCR2Q9UPI3 526 aa19.82■□□□□ 0.76
TPM4-201ENST00000300933 AK6Q9Y3D8 172 aaKnown RBP19.82■□□□□ 0.76
TPM4-201ENST00000300933 PCP4L1A6NKN8 68 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 H3BUI4 141 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 IL11P20809 199 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 LCN1P31025 176 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 TSPAN5P62079 268 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 PHF19Q5T6S3 580 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 PYHIN1Q6K0P9 492 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 FAM199XQ6PEV8 388 aaPredicted RBP19.81■□□□□ 0.76
TPM4-201ENST00000300933 HDDC2Q7Z4H3 204 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 PM20D2Q8IYS1 436 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 IZUMO1Q8IYV9 350 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 POMGNT2Q8NAT1 580 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 CCDC74BQ96LY2 380 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 LIN7BQ9HAP6 207 aa19.81■□□□□ 0.76
TPM4-201ENST00000300933 TAS2R5Q9NYW4 299 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms