RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 AUP1Q9Y679 476 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 PCNX3Q9H6A9 2034 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 ICOSLGO75144 302 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 NDUFB6O95139 128 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 ITGA5P08648 1049 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 RAB40ALP0C0E4 278 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 IFNGR1P15260 489 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 ALOX5APP20292 161 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 RABIFP47224 123 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 PSMD4P55036 377 aaKnown RBP22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 ELFN2Q5R3F8 820 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 DCAF12L2Q5VW00 463 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 NKAIN2Q5VXU1 208 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 Q6ZS52 159 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 FAM71CQ8NEG0 241 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 RAB40AQ8WXH6 277 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 PHYHIPQ92561 330 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 GPX7Q96SL4 187 aaPredicted RBP22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 UBQLN4Q9NRR5 601 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 KCNN3Q9UGI6 736 aa22.09■■□□□ 1.13
SPTSSA-201ENST00000298130 ASXL3Q9C0F0 2248 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 FXYD6-FXYD2A0A087WZ82 144 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 SPTY2D1-AS1A0A0U1RR47 76 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 PLSCR5A0PG75 271 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 ZNF264O43296 627 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 PRAF2O60831 178 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 CALCBP10092 127 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 DMWDQ09019 674 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 IL10RAQ13651 578 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 OR51S1Q8NGJ8 323 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 FXYD6Q9H0Q3 95 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 ELOVL3Q9HB03 270 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 RNF215Q9Y6U7 377 aa22.08■■□□□ 1.13
SPTSSA-201ENST00000298130 RBBP9O75884 186 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 POU3F4P49335 361 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF626Q68DY1 528 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 MARCH3Q86UD3 253 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 CMTM3Q96MX0 182 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 LRRC61Q9BV99 259 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 PCDH15Q96QU1 1955 aa22.08■■□□□ 1.12
SPTSSA-201ENST00000298130 TRBV5-5A0A0J9YX44 114 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 NAP1L6A6NFF2 107 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 CHURC1-FNTBB4DL54 471 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 PNPP00491 289 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 RRASP10301 218 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF35P13682 527 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 OLFML2AQ68BL7 652 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 PTPMT1Q8WUK0 201 aaPredicted RBP22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 CD207Q9UJ71 328 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 WDFY3Q8IZQ1 3526 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 GOSR2O14653 212 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 GTF2F2P13984 249 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 NFYAP23511 347 aaPredicted RBP22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 TMEM205Q6UW68 189 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 C3P1Q6ZMU1 363 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 INTS14Q96SY0 518 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 COMMD4Q9H0A8 199 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 TMEM138Q9NPI0 162 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 MOKQ9UQ07 419 aa22.07■■□□□ 1.12
SPTSSA-201ENST00000298130 IGHV5-51A0A0C4DH38 117 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 FAM221BA6H8Z2 402 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 HIST1H2ABP04908 130 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC25A1P53007 311 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 FNDC7Q5VTL7 733 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 TMEM184AQ6ZMB5 413 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 HIST3H2AQ7L7L0 130 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF227Q86WZ6 799 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 HIST1H2ACQ93077 130 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 FBRSQ9HAH7 460 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 GMEB2Q9UKD1 530 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 PRAMEF26H0Y7S4 382 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 CTAG2O75638 210 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 CD3DP04234 171 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 PNMTP11086 282 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 CD1CP29017 333 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF117Q03924 483 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 OR7E24Q6IFN5 339 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 TTLL10Q6ZVT0 673 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 DHCR7Q9UBM7 475 aaKnown RBP22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 STEAP1Q9UHE8 339 aa22.06■■□□□ 1.12
SPTSSA-201ENST00000298130 SPARCP09486 303 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 IGLV3-21P80748 117 aaPredicted RBP22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 ZP2Q05996 745 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 MUC20Q8N307 709 aaPredicted RBP22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 GPR148Q8TDV2 347 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 KLHL15Q96M94 604 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 MCRIP1C9JLW8 97 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 LGALS8O00214 317 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 MPZL1O95297 269 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 ACSM4P0C7M7 580 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 MAPK3P27361 379 aaPredicted RBP22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 C2orf76Q3KRA6 126 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 ASPHD2Q6ICH7 369 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 OR10K2Q6IF99 312 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 IDO2Q6ZQW0 420 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 GALNT11Q8NCW6 608 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 STK35Q8TDR2 534 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 HS3ST3A1Q9Y663 406 aa22.05■■□□□ 1.12
SPTSSA-201ENST00000298130 GGT3PA6NGU5 568 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms