RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PYCR1P32322 319 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 CD96P40200 585 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 CRYBB2P43320 205 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 AP2S1P53680 142 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 LCN6P62502 163 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 OC90Q02509 493 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 TLE3Q04726 772 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ZNF239Q16600 458 aaKnown RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 ZFP69Q49AA0 526 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 SOWAHCQ53LP3 525 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 EEF1A1P5Q5VTE0 462 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 AGAP6Q5VW22 663 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 KCTD20Q7Z5Y7 419 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 ZNF248Q8NDW4 579 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 AGAP4Q96P64 663 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 DCSTAMPQ9H295 470 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 TMEM185BQ9H7F4 350 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 DEPPQ9NTK1 212 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 DLL3Q9NYJ7 618 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 VSX1Q9NZR4 365 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 TRAPPC4Q9Y296 219 aa13.95□□□□□ -0.18
LSM6-201ENST00000296581 RPH3AQ9Y2J0 694 aaPredicted RBP13.95□□□□□ -0.18
LSM6-201ENST00000296581 PRSS37A4D1T9 235 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 LRRC3CA6NJW4 275 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 DCTN6O00399 190 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 HLA-DOBP13765 273 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 SLC35F2Q8IXU6 374 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 OR6V1Q8N148 313 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 CLEC1AQ8NC01 280 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 OR6K6Q8NGW6 343 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 DACH2Q96NX9 599 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 OR5B2Q96R09 309 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 SYT4Q9H2B2 425 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 PLSCR3Q9NRY6 295 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 BABAM2Q9NXR7 383 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 MED13Q9UHV7 2174 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 A0A0X1KG70 313 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 OR2M5A3KFT3 312 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 CENPXA8MT69 81 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 FAM25AB3EWG3 89 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 FAM25CB3EWG5 89 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 FAM25GB3EWG6 89 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 NEURL1O76050 574 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 AKR7A3O95154 331 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 PTTG1O95997 202 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 CNR1P21554 472 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 CASRP41180 1078 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 NAA10P41227 235 aaPredicted RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 CAPZA2P47755 286 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 SERPINB10P48595 397 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 P2RY4P51582 365 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 PXKQ7Z7A4 578 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 KLBQ86Z14 1044 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 KDM8Q8N371 416 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 KBTBD8Q8NFY9 601 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 SMAP2Q8WU79 429 aaPredicted RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 MIB2Q96AX9 1013 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 C5orf34Q96MH7 638 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 UTP23Q9BRU9 249 aaKnown RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 RNF167Q9H6Y7 350 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 SRA1Q9HD15 236 aaKnown RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 NPAP1Q9NZP6 1156 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 ZMIZ1Q9ULJ6 1067 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 FKBP7Q9Y680 259 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 PMF1-BGLAPU3KQ54 211 aa13.94□□□□□ -0.18
LSM6-201ENST00000296581 ZFHX2Q9C0A1 2572 aaPredicted RBP13.94□□□□□ -0.18
LSM6-201ENST00000296581 A0A1W2PNR3 127 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 A6NIZ1 184 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SELENOFO60613 162 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 MT-ND5P03915 603 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 DAP3P51398 398 aaKnown RBP13.93□□□□□ -0.18
LSM6-201ENST00000296581 RAP1BP61224 184 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 RAP1AP62834 184 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 DGUOKQ16854 277 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 RAET1LQ5VY80 246 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SSX6Q7RTT6 188 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 PM20D2Q8IYS1 436 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 ASB10Q8WXI3 467 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 B3GAT1Q9P2W7 334 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
LSM6-201ENST00000296581 NCKAP5O14513 1909 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 FAM171A2A8MVW0 826 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 H3BUI4 141 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SLC30A4O14863 429 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 OPN1LWP04000 364 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 CFL1P23528 166 aaKnown RBP13.93□□□□□ -0.18
LSM6-201ENST00000296581 GABRA5P31644 462 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SFTPDP35247 375 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 SOX8P57073 446 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 OR2B6P58173 313 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 B3GALT5-AS1P59052 145 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 HSF1Q00613 529 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 GPR50Q13585 617 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 MELKQ14680 651 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 ATP1A1-AS1Q5TC04 95 aa13.93□□□□□ -0.18
LSM6-201ENST00000296581 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms