RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 HNRNPKP61978 463 aaKnown RBP eCLIP18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 RPL6Q02878 288 aaKnown RBP18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 EGR3Q06889 387 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 CAMK2DQ13557 499 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 ETFDHQ16134 617 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 ACKR1Q16570 336 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 LANCL3Q6ZV70 420 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 OTOSQ8NHW6 89 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 RAB40AQ8WXH6 277 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 PPP1R14AQ96A00 147 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 OR11A1Q9GZK7 315 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 KCNK15Q9H427 330 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 C12orf10Q9HB07 376 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 TAS2R10Q9NYW0 307 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 MKL2Q9ULH7 1088 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 GTF2A1LQ9UNN4 478 aa18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 ASCC3Q8N3C0 2202 aaKnown RBP18.02■□□□□ 0.47
SCUBE1-201ENST00000290460 ALG1L2C9J202 215 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 FBLP22087 321 aaKnown RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 SSTR2P30874 369 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 PER3P56645 1201 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 MEP1BQ16820 701 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 ZBTB37Q5TC79 503 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 GPR148Q8TDV2 347 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 SEC22CQ9BRL7 303 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 ELOVL3Q9HB03 270 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 ZNF304Q9HCX3 659 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 MRPL39Q9NYK5 338 aaKnown RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 IGHV1OR21-1A0A087WYE8 117 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 TRBV5-7A0A0A0MS05 114 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 ANKRD20A5PA0PJZ0 165 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 TMEM212A6NML5 194 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 SUSD5O60279 629 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 FBXO45P0C2W1 286 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 POU3F3P20264 500 aaPredicted RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 IGFBP4P22692 258 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 LINC00303Q3SY05 128 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 SLC25A25Q6KCM7 469 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 OGFOD3Q6PK18 319 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 ZNF782Q6ZMW2 699 aaPredicted RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 MAMSTRQ6ZN01 415 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 C16orf47Q6ZP98 133 aaPredicted RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 HGDQ93099 445 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 C4orf45Q96LM5 186 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 MESP1Q9BRJ9 268 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 SEMA4CQ9C0C4 833 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 VN1R1Q9GZP7 353 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 RAB33BQ9H082 229 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 CDCP1Q9H5V8 836 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 METTL17Q9H7H0 456 aaPredicted RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 RABL2AQ9UBK7 228 aaPredicted RBP18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 RABL2BQ9UNT1 228 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 B9D1Q9UPM9 204 aa18.01■□□□□ 0.47
SCUBE1-201ENST00000290460 A0A1B0GTQ1 180 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 CDC40O60508 579 aaKnown RBP eCLIP18■□□□□ 0.47
SCUBE1-201ENST00000290460 SRFP11831 508 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 GP1BBP13224 206 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 DNASE1P24855 282 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 RAD52P43351 418 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 EFNB2P52799 333 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 AP3S2P59780 193 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 ARHGAP40Q5TG30 622 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 OR5M10Q6IEU7 315 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 MAMDC2Q7Z304 686 aaPredicted RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 NUP54Q7Z3B4 507 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 TSEN15Q8WW01 171 aaKnown RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 COPS7AQ9UBW8 275 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 SLC22A13Q9Y226 551 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 TMEM14AQ9Y6G1 99 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 WDFY3Q8IZQ1 3526 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 TMED7-TICAM2A0A0A6YYA0 188 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 IGHV3-20A0A0C4DH32 117 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 PRSS37A4D1T9 235 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 SULT1B1O43704 296 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 SLC16A7O60669 478 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 WNT11O96014 354 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 PGCP20142 388 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 CSF2RBP32927 897 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 INSM1Q01101 510 aaPredicted RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 LGALSLQ3ZCW2 172 aaPredicted RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 SIX5Q8N196 739 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 OR2T35Q8NGX2 323 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 ZNF417Q8TAU3 575 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 DAZLQ92904 295 aaKnown RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 MVB12AQ96EY5 273 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 MSANTD3Q96H12 275 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 DCBLD2Q96PD2 775 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 ZNF436Q9C0F3 470 aaPredicted RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 NOX3Q9HBY0 568 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 MRPL22Q9NWU5 206 aaKnown RBP18■□□□□ 0.47
SCUBE1-201ENST00000290460 CTSFQ9UBX1 484 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 TMED7Q9Y3B3 224 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 ETV7Q9Y603 341 aa18■□□□□ 0.47
SCUBE1-201ENST00000290460 G3V3Q6 166 aa17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 ACOT7O00154 380 aa17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 PNPP00491 289 aa17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 SPARCP09486 303 aa17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 CTLA4P16410 223 aa17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 CSRP1P21291 193 aaKnown RBP17.99■□□□□ 0.47
SCUBE1-201ENST00000290460 CCKBRP32239 447 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms