RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 EIF1AYO14602 144 aaKnown RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 KLK2P20151 261 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 HOXD12P35452 270 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 PTGDSP41222 190 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 MC2RQ01718 297 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 CORO6Q6QEF8 472 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF676Q8N7Q3 588 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 DNAAF1Q8NEP3 725 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 RGP1Q92546 391 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 MRPL48Q96GC5 212 aaKnown RBP16.13■□□□□ 0.17
CAPN1-201ENST00000279247 CPNE5Q9HCH3 593 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 FRRS1LQ9P0K9 344 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 TRAPPC4Q9Y296 219 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 PCNX2A6NKB5 2137 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF318Q5VUA4 2279 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 NSG1A0A0A6YYJ2 146 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 MS4A18H0YCH9 400 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 RFX2P48378 723 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 MYBPHQ13203 477 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 MS4A18Q3C1V0 323 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 EMC4Q5J8M3 183 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 PXKQ7Z7A4 578 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 CDC20BQ86Y33 519 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ST8SIA1Q92185 356 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ZFP3Q96NJ6 502 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 ELOVL3Q9HB03 270 aa16.13■□□□□ 0.17
CAPN1-201ENST00000279247 A0A0G2JK05 382 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 FTCDNL1E5RQL4 147 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 PIN1P1O15428 100 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 SC5DO75845 299 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 SERPINA3P01011 423 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 IGF2P01344 180 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 COX6A1P12074 109 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TALDO1P37837 337 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 FOLR3P41439 243 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 HTR3AP46098 478 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TRAM1Q15629 374 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 OR11G2Q8NGC1 345 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 OR5AK2Q8NH90 309 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TTC9Q92623 222 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 DDIT4LQ96D03 193 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 PPIEQ9UNP9 301 aaKnown RBP16.12■□□□□ 0.17
CAPN1-201ENST00000279247 N6AMT1Q9Y5N5 214 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 IGKV1D-43A0A0B4J1Z2 117 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 SLC22A23A1A5C7 686 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TACSTD2P09758 323 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 CCL3P10147 92 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 ALOX5APP20292 161 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TMEM176BQ3YBM2 270 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-201ENST00000279247 CEP78Q5JTW2 689 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 STK35Q8TDR2 534 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 ELP5Q8TE02 316 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 MRPL22Q9NWU5 206 aaKnown RBP16.12■□□□□ 0.17
CAPN1-201ENST00000279247 TEKT2Q9UIF3 430 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF281Q9Y2X9 895 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 DCHS1Q96JQ0 3298 aa16.12■□□□□ 0.17
CAPN1-201ENST00000279247 A8MV72 311 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ARL6IP5O75915 188 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 THBS2P35442 1172 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 APOBEC1P41238 236 aaKnown RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 PLPPR5Q32ZL2 321 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 B3GNTL1Q67FW5 361 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 H1FNTQ75WM6 255 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF519Q8TB69 540 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 AKAP7Q9P0M2 348 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 NXT1Q9UKK6 140 aaKnown RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 SLC22A13Q9Y226 551 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 UPK3AO75631 287 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 MAS1P04201 325 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 FBXO45P0C2W1 286 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 JMJD7P0C870 316 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 SRMP19623 302 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 BIDP55957 195 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 OR2B6P58173 313 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 DCAF12Q5T6F0 453 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF468Q5VIY5 522 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 SERPINA12Q8IW75 414 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 GDPD1Q8N9F7 314 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 WDSUB1Q8N9V3 476 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 OR2Y1Q8NGV0 311 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 POC1BQ8TC44 478 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 TRIM3O75382 744 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 RAB25P57735 213 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 CAMK2DQ13557 499 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ALKBH1Q13686 389 aaKnown RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 NTRK2Q16620 822 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 RAB11FIP2Q7L804 512 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 PPP1R3EQ9H7J1 279 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 WDR54Q9H977 334 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 SDHAF3Q9NRP4 125 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 MRPL39Q9NYK5 338 aaKnown RBP16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ADAM30Q9UKF2 790 aa16.11■□□□□ 0.17
CAPN1-201ENST00000279247 ZNF879B4DU55 563 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 CDX4O14627 284 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 RAMP1O60894 148 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 GALP22466 123 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 HSF1Q00613 529 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 CDC20Q12834 499 aa16.1■□□□□ 0.17
CAPN1-201ENST00000279247 TRA2AQ13595 282 aaKnown RBP eCLIP16.1■□□□□ 0.17
CAPN1-201ENST00000279247 EIF2B1Q14232 305 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms