RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ACOD1A6NK06 481 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 HRKO00198 91 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 YKT6O15498 198 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 GMDSO60547 372 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 UPK3AO75631 287 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ASAH2BP0C7U1 165 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 IFNGR1P15260 489 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 BLKP51451 505 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ZP1P60852 638 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 DHODHQ02127 395 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 GRK1Q15835 563 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 DEFB133Q30KQ1 61 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ALG10Q5BKT4 473 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 SIGIRRQ6IA17 410 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 CDC20BQ86Y33 519 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 SFTPA2Q8IWL1 248 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 SDR16C5Q8N3Y7 309 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF433Q8N7K0 673 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-201ENST00000277198 OR2T35Q8NGX2 323 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 OR2T4Q8NH00 348 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF417Q8TAU3 575 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 SYNPRQ8TBG9 265 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 LMX1AQ8TE12 382 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 RGP1Q92546 391 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-201ENST00000277198 DACT3Q96B18 629 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-201ENST00000277198 Q96M85 177 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-201ENST00000277198 MMP25Q9NPA2 562 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 TAS2R10Q9NYW0 307 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 TAS2R5Q9NYW4 299 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 OR5V1Q9UGF6 321 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.53
C9orf3-201ENST00000277198 ZFHX4Q86UP3 3567 aa11.71□□□□□ -0.54
C9orf3-201ENST00000277198 TMEM212A6NML5 194 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 NDUFB5O43674 189 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 KHDRBS3O75525 346 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ABHD16AO95870 558 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 HPXP02790 462 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 AQP2P41181 271 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ZNF81P51508 661 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 PPP1CAP62136 330 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 LIPNQ5VXI9 398 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 IZUMO1Q8IYV9 350 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 C7orf57Q8NEG2 295 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 MOSPD2Q8NHP6 518 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 SUN5Q8TC36 379 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ZPLD1Q8TCW7 415 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ADAD1Q96M93 576 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 HCN3Q9P1Z3 774 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ERVK-19Q9WJR5 959 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ICMTO60725 284 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 ZNF254O75437 659 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 IL33O95760 270 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 UBL4AP11441 157 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 CTSEP14091 401 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 HPGDP15428 266 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 P2RX1P51575 399 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 CTXN1P60606 82 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 RASGEF1BQ0VAM2 473 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 SKP2Q13309 424 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 FAM209AQ5JX71 171 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 SFRP4Q6FHJ7 346 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 APOOLQ6UXV4 268 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 MED25Q71SY5 747 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 NLRC3Q7RTR2 1065 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 BEST4Q8NFU0 473 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 FAM174AQ8TBP5 190 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 CCDC74AQ96AQ1 378 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 TMPRSS13Q9BYE2 586 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 COMMD4Q9H0A8 199 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 CCDC86Q9H6F5 360 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 WDR76Q9H967 626 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 NOX3Q9HBY0 568 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 GRHPRQ9UBQ7 328 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 MRTO4Q9UKD2 239 aaKnown RBP11.7□□□□□ -0.54
C9orf3-201ENST00000277198 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
C9orf3-201ENST00000277198 COL5A1P20908 1838 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-201ENST00000277198 TRBV5-7A0A0A0MS05 114 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 H0YIG0 161 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 SCDO00767 359 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 NDUFB6O95139 128 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 PPICP45877 212 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 SLC6A8P48029 635 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 CENPAP49450 140 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 VEGFCP49767 419 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 BLVRAP53004 296 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 RAB14P61106 215 aa11.69□□□□□ -0.54
C9orf3-201ENST00000277198 RAP2BP61225 183 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms