RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 SOWAHCQ53LP3 525 aaPredicted RBP13.08□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM106AQ96A25 262 aa13.08□□□□□ -0.31
PDLIM2-201ENST00000265810 ACOXLQ9NUZ1 547 aa13.08□□□□□ -0.31
PDLIM2-201ENST00000265810 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 LRRTM2O43300 516 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SLC2A5P22732 501 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SPOCK1Q08629 439 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SLC38A9Q8NBW4 561 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 APH1AQ96BI3 265 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 LRFN5Q96NI6 719 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 TGIF2Q9GZN2 237 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 PCDHB16Q9NRJ7 776 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 LUZP4Q9P127 313 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 A6NIN4 97 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 A6NLC8 198 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 GABARAPO95166 117 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 IL1AP01583 271 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SLC2A1P11166 492 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 GMFBP60983 142 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 SKP2Q13309 424 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ZNF782Q6ZMW2 699 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 VASH1Q7L8A9 365 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 PHC2Q8IXK0 858 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CPT1CQ8TCG5 803 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ZFAND2BQ8WV99 257 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 RFT1Q96AA3 541 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 OR14A2Q96R54 314 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CCNKO75909 580 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CCL3P10147 92 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 MGAT2Q10469 447 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 CEBPEQ15744 281 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 AWAT2Q6E213 333 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 OR8S1Q8NH09 359 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 URM1Q9BTM9 101 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ASH2LQ9UBL3 628 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 V9GY05 133 aa13.08□□□□□ -0.32
PDLIM2-201ENST00000265810 ACP1P24666 158 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ALKBH1Q13686 389 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ZNF766Q5HY98 468 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 FHL5Q5TD97 284 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 FCAMRQ8WWV6 532 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 SPSB2Q99619 263 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 PPP5CP53041 499 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 CFHR1Q03591 330 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 RBPJQ06330 500 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 TGIF1Q15583 401 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 CSRP2Q16527 193 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 DCAF10Q5QP82 559 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 MDGA2Q7Z553 956 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 RAB3AP20336 220 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ACAA2P42765 397 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 RGS19P49795 217 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 ATG4DQ86TL0 474 aaPredicted RBP13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 OR2V1Q8NHB1 315 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 HS3ST3B1Q9Y662 390 aa13.07□□□□□ -0.32
PDLIM2-201ENST00000265810 THEM4Q5T1C6 240 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 CNIH2Q6PI25 160 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 XKRXQ6PP77 449 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 AKAP14Q86UN6 197 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 POTEKPQ9BYX7 375 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 RNF167Q9H6Y7 350 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 REV1Q9UBZ9 1251 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 PLEKHA6Q9Y2H5 1048 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 TRAV17A0A0B4J275 112 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 MASP2O00187 686 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 RBBP9O75884 186 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 GJC3Q8NFK1 279 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 MED28Q9H204 178 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 COMMD9Q9P000 198 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 TAF4O00268 1085 aa13.06□□□□□ -0.32
PDLIM2-201ENST00000265810 PCSK6P29122 969 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms