RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 RAB5CP51148 216 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 ACTA2P62736 377 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 ACTG2P63267 376 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 PRDX1Q06830 199 aaKnown RBP11.96□□□□□ -0.5
NUP54-201ENST00000264883 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.5
NUP54-201ENST00000264883 SSX2Q16385 188 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 NCMAPQ5T1S8 102 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 TMEM244Q5VVB8 128 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 METRNLQ641Q3 311 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 ZNF793Q6ZN11 406 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 ERN2Q76MJ5 926 aaKnown RBP11.96□□□□□ -0.5
NUP54-201ENST00000264883 NDUFAF7Q7L592 441 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 CYB561A3Q8NBI2 242 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 OR8S1Q8NH09 359 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 CNRIP1Q96F85 164 aaPredicted RBP11.96□□□□□ -0.5
NUP54-201ENST00000264883 C16orf58Q96GQ5 468 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 TEX101Q9BY14 249 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 SLITRK2Q9H156 845 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 TSPAN10Q9H1Z9 355 aaPredicted RBP11.96□□□□□ -0.5
NUP54-201ENST00000264883 FKRPQ9H9S5 495 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 GNG8Q9UK08 70 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 KCNE3Q9Y6H6 103 aa11.96□□□□□ -0.5
NUP54-201ENST00000264883 TBC1D3KA0A087X1G2 549 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 MEIS3P1A6NDR6 274 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 TBC1D3BA6NDS4 549 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 TBC1D3FA6NER0 549 aaPredicted RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 XRCC3O43542 346 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 ITGA3P26006 1051 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 PTGER1P34995 402 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 PSMB10P40306 273 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 PBX2P40425 430 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 MAGEB1P43366 347 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 AIMP2Q13155 320 aaKnown RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 MST1LQ2TV78 715 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 TBC1D3GQ6DHY5 549 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 FIGNL1Q6PIW4 674 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 CCDC116Q8IYX3 515 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 DND1Q8IYX4 353 aaKnown RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 CDK20Q8IZL9 346 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 SYS1Q8N2H4 156 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 ARRDC1Q8N5I2 433 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 AMER3Q8N944 861 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 ZNF383Q8NA42 475 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 ADAMTS15Q8TE58 950 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 SNX33Q8WV41 574 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 TMED6Q8WW62 240 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 OR8D1Q8WZ84 308 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 DVL3Q92997 716 aaPredicted RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 TRPV4Q9HBA0 871 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 SIDT1Q9NXL6 827 aaKnown RBP11.95□□□□□ -0.5
NUP54-201ENST00000264883 NCDNQ9UBB6 729 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 CES1P1Q9UKY3 287 aa11.95□□□□□ -0.5
NUP54-201ENST00000264883 CPED1A4D0V7 1026 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 A6NLC8 198 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 GPR89AB7ZAQ6 455 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 RNASEK-C17orf49H0YIS7 233 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 AIFM1O95831 613 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 CD3DP04234 171 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 SLC35G4P0C7Q5 338 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 GPR89BP0CG08 455 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 PMELP40967 661 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 RGS19P49795 217 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 NTHL1P78549 312 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 CRMP1Q14194 572 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ZNF77Q15935 545 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 YOD1Q5VVQ6 348 aaPredicted RBP11.94□□□□□ -0.5
NUP54-201ENST00000264883 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ARL14Q8N4G2 192 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 OR2L5Q8NG80 312 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 AKR7LQ8NHP1 331 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 SLAMF9Q96A28 289 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 RAB7BQ96AH8 199 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 LRFN5Q96NI6 719 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 FBXO4Q9UKT5 387 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 SLC35A3Q9Y2D2 325 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 NOP16Q9Y3C1 178 aaKnown RBP11.94□□□□□ -0.5
NUP54-201ENST00000264883 ZNF780BQ9Y6R6 833 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 A0A1W2PR48 441 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 F8VVB4 439 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 F8VWA3 439 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 GPRIN2O60269 458 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ADRB3P13945 408 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 MAKP20794 623 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 PSMB5P28074 263 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 CAV2P51636 162 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 PRKXP51817 358 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 HGFACQ04756 655 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 RELQ04864 619 aaPredicted RBP11.94□□□□□ -0.5
NUP54-201ENST00000264883 LTBQ06643 244 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 SKP2Q13309 424 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms