RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ENTPD5O75356 428 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 UBL3O95164 117 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 RAB36O95755 333 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 IFNW1P05000 195 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 PATE4P0C8F1 98 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 ACADSP16219 412 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 FUT4P22083 530 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 YAP1P46937 504 aaKnown RBP13.89□□□□□ -0.19
USE1-201ENST00000263897 GSK3BP49841 420 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 PPOXP50336 477 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 CLRN1P58418 232 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
USE1-201ENST00000263897 KRT80Q6KB66 452 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 CBLL1Q75N03 491 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 ANKS4BQ8N8V4 417 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 ASB10Q8WXI3 467 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 MCHR2Q969V1 340 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 BPIFA2Q96DR5 249 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 ZNF347Q96SE7 839 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 SEPHS2Q99611 448 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
USE1-201ENST00000263897 CHD3Q12873 2000 aaKnown RBP13.88□□□□□ -0.19
USE1-201ENST00000263897 FFAR1O14842 300 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 PIP5K1CO60331 668 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 CRLF1O75462 422 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 TRMUO75648 421 aaKnown RBP13.88□□□□□ -0.19
USE1-201ENST00000263897 FARS2O95363 451 aaKnown RBP13.88□□□□□ -0.19
USE1-201ENST00000263897 ZNF682O95780 498 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 SERPINA5P05154 406 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 IFI30P13284 250 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 PDLIM4P50479 330 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 NUDT2P50583 147 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
USE1-201ENST00000263897 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
USE1-201ENST00000263897 MYBPC1Q00872 1141 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 RAB39AQ14964 217 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 ARMC4Q5T2S8 1044 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 SVOPLQ8N434 492 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 CMTM5Q96DZ9 223 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 SH3GL3Q99963 347 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 FNDC11Q9BVV2 318 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 RAB1BQ9H0U4 201 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 YAE1D1Q9NRH1 226 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 MAN2C1Q9NTJ4 1040 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
USE1-201ENST00000263897 RHCGQ9UBD6 479 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 CMAHPQ9Y471 501 aa13.88□□□□□ -0.19
USE1-201ENST00000263897 NPIPB13A6NJU9 1138 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 VWC2LB2RUY7 222 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 NPIPB4C9JG80 1138 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 J3KTA2 159 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 NDUFS8O00217 210 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 GLRXP35754 106 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 ZNF84P51523 738 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 ZNF133P52736 654 aaPredicted RBP13.87□□□□□ -0.19
USE1-201ENST00000263897 PSME3P61289 254 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 TRAM2Q15035 370 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 TMEM249Q2WGJ8 235 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 NRN1LQ496H8 165 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 IFI44LQ53G44 452 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 FKBP9P1Q75LS8 142 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 DPPA2Q7Z7J5 298 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 ZNF584Q8IVC4 421 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 RNF113BQ8IZP6 322 aaKnown RBP13.87□□□□□ -0.19
USE1-201ENST00000263897 OFCC1Q8IZS5 231 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 NOXO1Q8NFA2 376 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 OR4K5Q8NGD3 323 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 GEMIN6Q8WXD5 167 aaKnown RBP13.87□□□□□ -0.19
USE1-201ENST00000263897 FOXN4Q96NZ1 517 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 TXNIPQ9H3M7 391 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 MYOZ1Q9NP98 299 aaPredicted RBP13.87□□□□□ -0.19
USE1-201ENST00000263897 HIF3AQ9Y2N7 669 aa13.87□□□□□ -0.19
USE1-201ENST00000263897 LOC390937A0A1W2PQ73 354 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 SH3PXD2BA1X283 911 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 MGRN1O60291 552 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 SNX3O60493 162 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 SERPINA1P01009 418 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 MAKP20794 623 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 DRD4P21917 467 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 USF1P22415 310 aaPredicted RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 PRDX6P30041 224 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 EVX1P49640 407 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 VLDLRP98155 873 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 PRKCDQ05655 676 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 TAF11Q15544 211 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 FXNQ16595 210 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 MSMPQ1L6U9 139 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 ALG10Q5BKT4 473 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 NRMQ8IXM6 262 aa13.86□□□□□ -0.19
USE1-201ENST00000263897 ZCCHC24Q8N2G6 241 aaKnown RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 MRPL24Q96A35 216 aaKnown RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 NMD3Q96D46 503 aaKnown RBP13.86□□□□□ -0.19
USE1-201ENST00000263897 HSH2DQ96JZ2 352 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms