RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 B8ZZF3 427 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 C5orf67F2Z3F1 127 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SDC3O75056 442 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CD14P08571 375 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 RRASP10301 218 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MYF5P13349 255 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 AP3S2P59780 193 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ZP2Q05996 745 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CLLU1Q5K131 121 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 EXOSC6Q5RKV6 272 aaKnown RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 FAM69AQ5T7M9 428 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ARHGAP40Q5TG30 622 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ZCCHC12Q6PEW1 402 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 UNQ9370/PRO34162Q6UXP9 181 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 IDO2Q6ZQW0 420 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 GPR119Q8TDV5 335 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CCDC74AQ96AQ1 378 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ELSPBP1Q96BH3 223 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CYYR1Q96J86 154 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MESP1Q9BRJ9 268 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 OR11A1Q9GZK7 315 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 TTYH1Q9H313 450 aaPredicted RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 DHCR7Q9UBM7 475 aaKnown RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 PRELID1Q9Y255 219 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 KIF26BQ2KJY2 2108 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 FITM1A5D6W6 292 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 OR5K3A6NET4 321 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 FAM25EA8MYX2 175 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ACOT7O00154 380 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SUSD5O60279 629 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 LMX1BO60663 402 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ECDO95905 644 aaPredicted RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 PNPP00491 289 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 HIST1H2ABP04908 130 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 TACSTD2P09758 323 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 THEGLP0DJG4 465 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 AKT2P31751 481 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 NUDT1P36639 197 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SPOCK1Q08629 439 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 BIKQ13323 160 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MFSD13AQ14CX5 517 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 WDR38Q5JTN6 314 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 HACD4Q5VWC8 232 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 TTLL10Q6ZVT0 673 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 HIST3H2AQ7L7L0 130 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 HIST1H2ACQ93077 130 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 FAM46BQ96A09 425 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MIB2Q96AX9 1013 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ZCCHC4Q9H5U6 513 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MMP25Q9NPA2 562 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 FBXL21Q9UKT6 434 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 FBXL3Q9UKT7 428 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 PIAS3Q9Y6X2 628 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 A0A1B0GUH1 482 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 PLSCR5A0PG75 271 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 MCRIP1C9JLW8 97 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SCDO00767 359 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CLDN4O14493 209 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 GPRIN2O60269 458 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SLC16A7O60669 478 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 PRAMEF2O60811 474 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 OR6A2O95222 327 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 TGM6O95932 706 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 UBL4AP11441 157 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ZNF28P17035 718 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 ACHEP22303 614 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 GPR3P46089 330 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 HLXQ14774 488 aaPredicted RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 C2orf76Q3KRA6 126 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 Q6ZS52 159 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 SLC16A9Q7RTY1 509 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 LRRTM1Q86UE6 522 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 C19orf47Q8N9M1 422 aaKnown RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 OR4S1Q8NGB4 309 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 OR51A2Q8NGJ7 313 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 TPSD1Q9BZJ3 242 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 NMNAT2Q9BZQ4 307 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 B3GNT4Q9C0J1 378 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 AKAP7Q9P0M2 348 aaPredicted RBP8.27□□□□□ -1.09
MSH4-201ENST00000263187 PCOLCE2Q9UKZ9 415 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 B9D1Q9UPM9 204 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 RWDD3Q9Y3V2 267 aa8.27□□□□□ -1.09
MSH4-201ENST00000263187 H0YIG0 161 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 ICOSLGO75144 302 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 SEMA4FO95754 770 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 IFNGR1P15260 489 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 KIR3DL2P43630 455 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 PRPS1P60891 318 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 CORO6Q6QEF8 472 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 ZNF227Q86WZ6 799 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 LINC00346Q8IVM7 164 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 CMIPQ8IY22 773 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 JAGN1Q8N5M9 183 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 SPERTQ8NA61 448 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms