RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HCCSP53701 268 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 ACSM1Q08AH1 577 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 BCL2A1Q16548 175 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 PDSS1Q5T2R2 415 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 TMPRSS11AQ6ZMR5 421 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 CREB3L2Q70SY1 520 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 OR9K2Q8NGE7 335 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 SPRYD4Q8WW59 207 aaPredicted RBP20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 SLC25A44Q96H78 314 aaPredicted RBP20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 ADAD1Q96M93 576 aaKnown RBP20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 SF3B5Q9BWJ5 86 aaKnown RBP20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 LIPGQ9Y5X9 500 aa20.4■□□□□ 0.86
SMARCB1-201ENST00000263121 ATE1O95260 518 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ITGB2P05107 769 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 BLVRAP53004 296 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 PMP22Q01453 160 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ETFDHQ16134 617 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 DNM1P34Q6PK57 102 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 SSX6Q7RTT6 188 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ATCAYQ86WG3 371 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ZADH2Q8N4Q0 377 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 RFLNBQ8N5W9 214 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 NOXO1Q8NFA2 376 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ABTB1Q969K4 478 aaPredicted RBP20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 CPNE4Q96A23 557 aaPredicted RBP20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 ISG20L2Q9H9L3 353 aaKnown RBP20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 TIGARQ9NQ88 270 aa20.39■□□□□ 0.86
SMARCB1-201ENST00000263121 SPTBN2O15020 2390 aa20.39■□□□□ 0.85
SMARCB1-201ENST00000263121 TVP23AA6NH52 213 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 GPANK1O95872 356 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ACTL6AO96019 429 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 LALBAP00709 142 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 IGHG1P01857 330 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 CPEP16870 476 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 NR4A1P22736 598 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 FMODQ06828 376 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ABLIM2Q6H8Q1 611 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ERI1Q8IV48 349 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 NEIL3Q8TAT5 605 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 COPS3Q9UNS2 423 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 LOC400499M0QZD8 3231 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 NPIPA2E9PIF3 369 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 NPIPA3F8WFD2 350 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 GADD45AP24522 165 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 PTGS2P35354 604 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 CLDN17P56750 224 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 HSF2Q03933 536 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 CAMK2DQ13557 499 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 TPBGQ13641 420 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ALDH16A1Q8IZ83 802 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 INTS14Q96SY0 518 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 DEFB127Q9H1M4 99 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 PTTG2Q9NZH5 202 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ZMIZ1Q9ULJ6 1067 aa20.38■□□□□ 0.85
SMARCB1-201ENST00000263121 ALPK2Q86TB3 2170 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 CFAP47Q6ZTR5 3102 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 IGKV1D-43A0A0B4J1Z2 117 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF716A6NP11 495 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 CENPBD1B2RD01 187 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 CLRN1P58418 232 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 AQP6Q13520 282 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 HIST3H3Q16695 136 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 THEM4Q5T1C6 240 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 VASNQ6EMK4 673 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 CDC20BQ86Y33 519 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 PHC2Q8IXK0 858 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 MEIOBQ8N635 442 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 ZIC4Q8N9L1 334 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 RPL3LQ92901 407 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF845Q96IR2 970 aaPredicted RBP20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF385AQ96PM9 386 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 YIPF3Q9GZM5 350 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 WDR76Q9H967 626 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 MRPL22Q9NWU5 206 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 NDUFB11Q9NX14 153 aa20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 COA3Q9Y2R0 106 aaPredicted RBP20.37■□□□□ 0.85
SMARCB1-201ENST00000263121 TNRC6AQ8NDV7 1962 aaKnown RBP20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 TRGV5A0A0B4J1U4 118 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF726A6NNF4 738 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 K7ENP7 123 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 RRP8O43159 456 aaKnown RBP20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 AKAP8O43823 692 aaKnown RBP20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 KHDRBS3O75525 346 aaKnown RBP20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 MT-ND5P03915 603 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF24P17028 368 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 PCSK6P29122 969 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ACTA2P62736 377 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ACTG2P63267 376 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 BDH1Q02338 343 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 GLO1Q04760 184 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 CDONQ4KMG0 1287 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 LIPKQ5VXJ0 399 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 INO80CQ6PI98 192 aaPredicted RBP20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ROBO4Q8WZ75 1007 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 RBP7Q96R05 134 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 MNTQ99583 582 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 BABAM2Q9NXR7 383 aa20.36■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF670-ZNF695F2Z2N8 137 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 TFECO14948 347 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 CYTIPO60759 359 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms