RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LIPHQ8WWY8 451 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 HS3ST3A1Q9Y663 406 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC5A10A0PJK1 596 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TFAP2AP05549 437 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TRILQ7L0X0 811 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 RPS19BP1Q86WX3 136 aaKnown RBP17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 ADGRF3Q8IZF5 1079 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 ACOXLQ9NUZ1 547 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC22A23A1A5C7 686 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 A8MVM7 634 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 KLRC4-KLRK1H3BQV0 150 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 ACOT8O14734 319 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 GLIPR1L1Q6UWM5 242 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TMEM178AQ8NBL3 297 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SPACA5Q96QH8 159 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SEMA4CQ9C0C4 833 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 OPA3Q9H6K4 179 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 FITM1A5D6W6 292 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 SCAF4O95104 1147 aaKnown RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 LIPAP38571 399 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 CPNE4Q96A23 557 aaPredicted RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 UBE2ZQ9H832 354 aaPredicted RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 OR51B4Q9Y5P0 310 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 DUSP6Q16828 381 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 NPFFR2Q9Y5X5 522 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 PUS1Q9Y606 427 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 ATPAF1Q5TC12 328 aaPredicted RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 OR4A16Q8NH70 328 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 FAM213BQ8TBF2 198 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 NKX3-1Q99801 234 aaPredicted RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF705GA8MUZ8 300 aaPredicted RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 GPRIN2O60269 458 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 SERPINF1P36955 418 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 STEAP3Q658P3 488 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 PGAP1Q75T13 922 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 ANGPTL5Q86XS5 388 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 TPPP3Q9BW30 176 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 NGBQ9NPG2 151 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 LHX6Q9UPM6 363 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 BOLA1Q9Y3E2 137 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 EVPLQ92817 2033 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 IGHEP01854 428 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 MSMO1Q15800 293 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 ZADH2Q8N4Q0 377 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 STT3BQ8TCJ2 826 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 FGF14Q92915 247 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 PARP12Q9H0J9 701 aaKnown RBP17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 KCND3Q9UK17 655 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 MMACHCQ9Y4U1 282 aa17.16■□□□□ 0.34
SMARCC1-201ENST00000254480 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 HMGN4O00479 90 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 PMPCAQ10713 525 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 OTUD1Q5VV17 481 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 ASTLQ6HA08 431 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 PAQR6Q6TCH4 344 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 EMG1Q92979 244 aaKnown RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 FBXO7Q9Y3I1 522 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF701M0R085 212 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 RRP8O43159 456 aaKnown RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 HOXC11O43248 304 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 YIF1BQ5BJH7 314 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 C6orf15Q6UXA7 325 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 BCORP1Q8N888 145 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 FAM3DQ96BQ1 224 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 DAZAP1Q96EP5 407 aaKnown RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 MED17Q9NVC6 651 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 GNG13Q9P2W3 67 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 IDSB3KWA1 339 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 CCSO14618 274 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 PIPP12273 146 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 PPT1P50897 306 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 GFERP55789 205 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 GPR176Q14439 515 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 MRGPRX1Q96LB2 322 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 CAMK2BQ13554 666 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 KCNJ8Q15842 424 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 RDH10Q8IZV5 341 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 EPHX3Q9H6B9 360 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 MMP17Q9ULZ9 603 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 IMPA2O14732 288 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 GPR137BO60478 399 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF728P0DKX0 622 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 SRMP19623 302 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 AFMIDQ63HM1 303 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 H1FNTQ75WM6 255 aaPredicted RBP17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 KCNJ15Q99712 375 aa17.15■□□□□ 0.34
SMARCC1-201ENST00000254480 CBR1P16152 277 aa17.14■□□□□ 0.34
SMARCC1-201ENST00000254480 RAB39BQ96DA2 213 aa17.14■□□□□ 0.34
SMARCC1-201ENST00000254480 DIMT1Q9UNQ2 313 aaKnown RBP17.14■□□□□ 0.34
SMARCC1-201ENST00000254480 GPR55Q9Y2T6 319 aaPredicted RBP17.14■□□□□ 0.34
SMARCC1-201ENST00000254480 PLA2G7Q13093 441 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 TESK1Q15569 626 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 OVCH1Q7RTY7 1134 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 SLC22A24Q8N4F4 322 aa17.14■□□□□ 0.33
SMARCC1-201ENST00000254480 DEFB108BQ8NET1 73 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms