RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ZNF285Q96NJ3 590 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 PPIL3Q9H2H8 161 aaKnown RBP14.23□□□□□ -0.13
RFX1-201ENST00000254325 SLCO1C1Q9NYB5 712 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 ZNF20P17024 532 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 SNRPD2P62316 118 aaKnown RBP14.23□□□□□ -0.13
RFX1-201ENST00000254325 LTBQ06643 244 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 ISXQ2M1V0 245 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 RAET1LQ5VY80 246 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 AGBL5Q8NDL9 886 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 OR8H1Q8NGG4 311 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 OR2I1PQ8NGU4 316 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 OR2G2Q8NGZ5 317 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 OR8S1Q8NH09 359 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 OIT3Q8WWZ8 545 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 MYEF2Q9P2K5 600 aaKnown RBP14.23□□□□□ -0.13
RFX1-201ENST00000254325 DKKL1Q9UK85 242 aa14.23□□□□□ -0.13
RFX1-201ENST00000254325 GABRA4P48169 554 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 CCR6P51684 374 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OC90Q02509 493 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 DMWDQ09019 674 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 H1FNTQ75WM6 255 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 CMTM4Q8IZR5 234 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZNF485Q8NCK3 441 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OR5M1Q8NGP8 315 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 IFI44Q8TCB0 444 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ADIPOR1Q96A54 375 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 EMC6Q9BV81 110 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZNF768Q9H5H4 540 aaKnown RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZNF43P17038 809 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 PRKXP51817 358 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 RRAS2P62070 204 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 SF3B4Q15427 424 aaKnown RBP eCLIP14.22□□□□□ -0.131e-7■■■■□ 22.6
RFX1-201ENST00000254325 EXOSC6Q5RKV6 272 aaKnown RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 ANKRD37Q7Z713 158 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OR6F1Q8NGZ6 308 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 HSD17B8Q92506 261 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZNF69Q9UC07 566 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TMEM269A0A1B0GVZ9 245 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 AIPO00170 330 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OR2J2O76002 312 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 RAB40ALP0C0E4 278 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ANXA3P12429 323 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 BIDP55957 195 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TRIM61Q5EBN2 209 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 EEF1A1P5Q5VTE0 462 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 LINC00114Q6XXX2 140 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 RAB40AQ8WXH6 277 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 DNASE2BQ8WZ79 361 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 PGLYRP3Q96LB9 341 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ABHD1Q96SE0 405 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ELL3Q9HB65 397 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZDBF2Q9HCK1 2354 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 A0A1B0GVI7 797 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TRABD2BA6NFA1 517 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 SHISA8B8ZZ34 492 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TCRBP04435 133 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TRAPPC2P0DI81 140 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 TRAPPC2BP0DI82 140 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 PLAURQ03405 335 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 KANSL1Q7Z3B3 1105 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 UBALD2Q8IYN6 164 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 PLPP5Q8NEB5 264 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OR4D9Q8NGE8 314 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ZNF431Q8TF32 576 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 SLC25A44Q96H78 314 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 DCBLD2Q96PD2 775 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 ACTR6Q9GZN1 396 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 OR51J1Q9H342 316 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 C12orf10Q9HB07 376 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 MED29Q9NX70 200 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 RABL2AQ9UBK7 228 aaPredicted RBP14.22□□□□□ -0.13
RFX1-201ENST00000254325 RABL2BQ9UNT1 228 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 LAMA3Q16787 3333 aa14.22□□□□□ -0.13
RFX1-201ENST00000254325 MEN1O00255 615 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 IGKV3-11P04433 115 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 GTF2F2P13984 249 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 APOBEC1P41238 236 aaKnown RBP14.21□□□□□ -0.13
RFX1-201ENST00000254325 STAC2Q6ZMT1 411 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 GRPEL2Q8TAA5 225 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 TNFAIP8L1Q8WVP5 186 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 ST8SIA1Q92185 356 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 CDX2Q99626 313 aaPredicted RBP14.21□□□□□ -0.13
RFX1-201ENST00000254325 HHLA2Q9UM44 414 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 SLC22A13Q9Y226 551 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 EMC9Q9Y3B6 208 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 TMEM265A0A087WTH1 108 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 SGCAQ16586 387 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 HYAL4Q2M3T9 481 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 FAM205BPQ63HN1 556 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 GCDHQ92947 438 aaPredicted RBP14.21□□□□□ -0.13
RFX1-201ENST00000254325 SNX18Q96RF0 628 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 S100A13Q99584 98 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 CHRNA10Q9GZZ6 450 aa14.21□□□□□ -0.13
RFX1-201ENST00000254325 MRM2Q9UI43 246 aaKnown RBP14.21□□□□□ -0.13
RFX1-201ENST00000254325 ACOT7O00154 380 aa14.21□□□□□ -0.14
RFX1-201ENST00000254325 CSN2P05814 226 aa14.21□□□□□ -0.14
RFX1-201ENST00000254325 ASAH2BP0C7U1 165 aa14.21□□□□□ -0.14
RFX1-201ENST00000254325 CLDN20P56880 219 aa14.21□□□□□ -0.14
RFX1-201ENST00000254325 RAB14P61106 215 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms