RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SGK494L7N484 410 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 PHF1O43189 567 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SYNGR4O95473 234 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SFTA3P0C7M3 94 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRSS56P0CW18 603 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 RPL12P30050 165 aaKnown RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 NPY4RP50391 375 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 EMP3P54852 163 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CD81P60033 236 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SYPL1Q16563 259 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRRT3Q5FWE3 981 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 NCR3LG1Q68D85 454 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF66Q6ZN08 573 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ADAMTS18Q8TE60 1221 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 UBXN10Q96LJ8 280 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SERTAD3Q9UJW9 196 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SLX4Q8IY92 1834 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 BLVRBP30043 206 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 AKR1C3P42330 323 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 PLGLB1Q02325 96 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 PJVKQ0ZLH3 352 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 AADACL3Q5VUY0 350 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SLC22A24Q8N4F4 322 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR5AP2Q8NGF4 316 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR2G2Q8NGZ5 317 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 IGSF8Q969P0 613 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 DDIT4LQ96D03 193 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 MBOAT4Q96T53 435 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 KLHL42Q9P2K6 505 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ACAD8Q9UKU7 415 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 LEFTY2O00292 366 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 TTRP02766 147 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 DBHP09172 617 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ADRA2CP18825 462 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 TSFMP43897 325 aaKnown RBP12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ATP1B3P54709 279 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 CST9Q5W186 159 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 LRRTM3Q86VH5 581 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 STT3BQ8TCJ2 826 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 SLIRPQ9GZT3 109 aaKnown RBP12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 NKX2-4Q9H2Z4 354 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 MED20Q9H944 212 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 B3GALT5Q9Y2C3 310 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 HSBP1O75506 76 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 TSPAN12O95859 305 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 CBX7O95931 251 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 RRASP10301 218 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 CTRB1P17538 263 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 MSX1P28360 303 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ARRB2P32121 409 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 CEBPEQ15744 281 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 CTRB2Q6GPI1 263 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 MZB1Q8WU39 189 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 MELKQ14680 651 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR1Q1Q15612 314 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF805Q5CZA5 627 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM26EQ8N5C1 309 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 GPR173Q9NS66 373 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 AKAP11Q9UKA4 1901 aa12.16□□□□□ -0.46
PCDHGA3-201ENST00000253812 ELOA3CA0A087WX78 387 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 AQP7O14520 342 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 DDAH2O95865 285 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 GPX2P18283 190 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 HNRNPA2B1P22626 353 aaKnown RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ELAVL4P26378 380 aaKnown RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ELOCQ15369 112 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 TOMM34Q15785 309 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 MEP1BQ16820 701 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRAMEF8Q5VWM4 474 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRAMEF7Q5VXH5 474 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 CSNK1A1LQ8N752 337 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 RXFP4Q8TDU9 374 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 SECTM1Q8WVN6 248 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR2A14Q96R47 310 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 IL17CQ9P0M4 197 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 MMP24Q9Y5R2 645 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF320A2RRD8 509 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 A8MVM7 634 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 TGFBR1P36897 503 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 TRA2BP62995 288 aaKnown RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ALKBH1Q13686 389 aaKnown RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 TTC9BQ8N6N2 239 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 KIAA1958Q8N8K9 716 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZFPM2Q8WW38 1151 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF845Q96IR2 970 aaPredicted RBP12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 KIRREL1Q96J84 757 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 CDCP1Q9H5V8 836 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 UCK1Q9HA47 277 aa12.15□□□□□ -0.46
PCDHGA3-201ENST00000253812 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms