RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 ALPLP05186 524 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 ITGA5P08648 1049 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 IGFBP1P08833 259 aaPredicted RBP20.08■□□□□ 0.81
APOE-201ENST00000252486 GRK5P34947 590 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 GIPRP48546 466 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 CRISP1P54107 249 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 PGGHGQ32M88 737 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 MESTQ5EB52 335 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 BHLHA15Q7RTS1 189 aaPredicted RBP20.08■□□□□ 0.81
APOE-201ENST00000252486 SSX8Q7RTT4 187 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 JAZF1Q86VZ6 243 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 BOD1Q96IK1 185 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 PSMG3-AS1Q96PY0 264 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 NDRG3Q9UGV2 375 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 KLHL21Q9UJP4 597 aa20.08■□□□□ 0.81
APOE-201ENST00000252486 CACNA1CQ13936 2221 aa20.08■□□□□ 0.8
APOE-201ENST00000252486 USP9XQ93008 2570 aaPredicted RBP20.07■□□□□ 0.8
APOE-201ENST00000252486 DHHO43323 396 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 LYZL6O75951 148 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 CLDN1O95832 211 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 RENP00797 406 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 IFNGP01579 166 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 HMGN1P05114 100 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 QDPRP09417 244 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 ZNF84P51523 738 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 CDK5Q00535 292 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 MYBPC1Q00872 1141 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 TRIP10Q15642 601 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 CEACAM16Q2WEN9 425 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 PHYHD1Q5SRE7 291 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 LRFN4Q6PJG9 635 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 LINGO2Q7L985 606 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 P2RY8Q86VZ1 359 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 C17orf78Q8N4C9 275 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 MCHR2Q969V1 340 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 NMD3Q96D46 503 aaKnown RBP20.07■□□□□ 0.8
APOE-201ENST00000252486 RNPEPL1Q9HAU8 725 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 SLC25A19Q9HC21 320 aa20.07■□□□□ 0.8
APOE-201ENST00000252486 VSX1Q9NZR4 365 aaPredicted RBP20.07■□□□□ 0.8
APOE-201ENST00000252486 TENM4Q6N022 2769 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 SLC22A23A1A5C7 686 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 ZNF99A8MXY4 864 aaPredicted RBP20.06■□□□□ 0.8
APOE-201ENST00000252486 HIST1H1CP16403 213 aaKnown RBP20.06■□□□□ 0.8
APOE-201ENST00000252486 GRNP28799 593 aaKnown RBP20.06■□□□□ 0.8
APOE-201ENST00000252486 GINS1Q14691 196 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 C10orf128Q5T292 105 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 DNM1P34Q6PK57 102 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 OR4Q3Q8NH05 313 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 MUS81Q96NY9 551 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 GABARAPL3Q9BY60 117 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 PRRG3Q9BZD7 231 aa20.06■□□□□ 0.8
APOE-201ENST00000252486 A1L4Q6 167 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 CASQ2O14958 399 aaPredicted RBP20.05■□□□□ 0.8
APOE-201ENST00000252486 MGRN1O60291 552 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 MITFO75030 526 aaPredicted RBP20.05■□□□□ 0.8
APOE-201ENST00000252486 HOXB1P14653 301 aaPredicted RBP20.05■□□□□ 0.8
APOE-201ENST00000252486 IGFBP2P18065 325 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 CDKN2AP42771 156 aaKnown RBP20.05■□□□□ 0.8
APOE-201ENST00000252486 SLC34A1Q06495 639 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.05■□□□□ 0.8
APOE-201ENST00000252486 RIPK1Q13546 671 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 GABRA6Q16445 453 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 SLC35F1Q5T1Q4 408 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 C9orf135Q5VTT2 229 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 ANKRD16Q6P6B7 361 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 SLC25A47Q6Q0C1 308 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 PACRGLQ8N7B6 248 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 OR52E2Q8NGJ4 325 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 OR1K1Q8NGR3 316 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 OR4K13Q8NH42 304 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 ACTR6Q9GZN1 396 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 CMC2Q9NRP2 79 aa20.05■□□□□ 0.8
APOE-201ENST00000252486 RRP15Q9Y3B9 282 aaKnown RBP20.05■□□□□ 0.8
APOE-201ENST00000252486 RIIAD1A6NNX1 92 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 CRABP1P29762 137 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 HOXC12P31275 282 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 CCKARP32238 428 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 FOXG1P55316 489 aaPredicted RBP20.04■□□□□ 0.8
APOE-201ENST00000252486 ARF1P84077 181 aaKnown RBP20.04■□□□□ 0.8
APOE-201ENST00000252486 NPRL3Q12980 569 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 PTGES3Q15185 160 aaKnown RBP20.04■□□□□ 0.8
APOE-201ENST00000252486 NRN1LQ496H8 165 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 TIMM23BQ5SRD1 257 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 LEG1Q6P5S2 330 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 PTCHD4Q6ZW05 846 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 ZNF627Q7L945 461 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 DMRTC2Q8IXT2 367 aaPredicted RBP20.04■□□□□ 0.8
APOE-201ENST00000252486 CCDC36Q8IYA8 594 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 ACBD4Q8NC06 268 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 SLC38A2Q96QD8 506 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 FOXB1Q99853 325 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 SPOCK3Q9BQ16 436 aa20.04■□□□□ 0.8
APOE-201ENST00000252486 TUBAL3A6NHL2 446 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 OR5H1A6NKK0 313 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 ZAR1LA6NP61 321 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 C19orf84I3L1E1 186 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 RAD51DO75771 328 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 ZNF3P17036 446 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 PAX7P23759 505 aa20.03■□□□□ 0.8
APOE-201ENST00000252486 GUCA1AP43080 201 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms