RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IGLV3-9A0A075B6K5 115 aa8.83□□□□□ -1
VPS50-201ENST00000251739 B4DSR2 109 aa8.83□□□□□ -1
VPS50-201ENST00000251739 FAM157AC9JC47 383 aa8.83□□□□□ -1
VPS50-201ENST00000251739 M0R3H8 397 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SERPINB7O75635 380 aa8.83□□□□□ -1
VPS50-201ENST00000251739 UBL3O95164 117 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SERPINA5P05154 406 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ITGA2P17301 1181 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PCMT1P22061 227 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SLC6A2P23975 617 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ALDH3B1P43353 468 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PTDSS1P48651 473 aaKnown RBP8.83□□□□□ -1
VPS50-201ENST00000251739 SEC24CP53992 1094 aa8.83□□□□□ -1
VPS50-201ENST00000251739 BIDP55957 195 aa8.83□□□□□ -1
VPS50-201ENST00000251739 LMO4P61968 165 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PIGFQ07326 219 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ZP4Q12836 540 aa8.83□□□□□ -1
VPS50-201ENST00000251739 CCNIQ14094 377 aa8.83□□□□□ -1
VPS50-201ENST00000251739 MAD2L1BPQ15013 274 aaPredicted RBP8.83□□□□□ -1
VPS50-201ENST00000251739 ZNF74Q16587 644 aa8.83□□□□□ -1
VPS50-201ENST00000251739 DUSP7Q16829 419 aa8.83□□□□□ -1
VPS50-201ENST00000251739 TRMT5Q32P41 509 aaKnown RBP8.83□□□□□ -1
VPS50-201ENST00000251739 RUNDC3AQ59EK9 446 aa8.83□□□□□ -1
VPS50-201ENST00000251739 BEND6Q5SZJ8 279 aaPredicted RBP8.83□□□□□ -1
VPS50-201ENST00000251739 LRFN4Q6PJG9 635 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PIWIL3Q7Z3Z3 882 aaKnown RBP8.83□□□□□ -1
VPS50-201ENST00000251739 RANBP3LQ86VV4 465 aaPredicted RBP8.83□□□□□ -1
VPS50-201ENST00000251739 SNX32Q86XE0 403 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SKA3Q8IX90 412 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PAQR4Q8N4S7 273 aaPredicted RBP8.83□□□□□ -1
VPS50-201ENST00000251739 DPP10Q8N608 796 aa8.83□□□□□ -1
VPS50-201ENST00000251739 OR6T1Q8NGN1 323 aa8.83□□□□□ -1
VPS50-201ENST00000251739 OR6N1Q8NGY5 312 aa8.83□□□□□ -1
VPS50-201ENST00000251739 STON2Q8WXE9 905 aa8.83□□□□□ -1
VPS50-201ENST00000251739 YIPF5Q969M3 257 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SEPHS2Q99611 448 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SYT3Q9BQG1 590 aa8.83□□□□□ -1
VPS50-201ENST00000251739 PCDHAC1Q9H158 963 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ZNF385DQ9H6B1 395 aa8.83□□□□□ -1
VPS50-201ENST00000251739 NPHS2Q9NP85 383 aa8.83□□□□□ -1
VPS50-201ENST00000251739 TMEM38BQ9NVV0 291 aa8.83□□□□□ -1
VPS50-201ENST00000251739 TAS2R5Q9NYW4 299 aa8.83□□□□□ -1
VPS50-201ENST00000251739 GLTPQ9NZD2 209 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SELENONQ9NZV5 590 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SLC7A8Q9UHI5 535 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ANGPT4Q9Y264 503 aa8.83□□□□□ -1
VPS50-201ENST00000251739 POFUT2Q9Y2G5 429 aa8.83□□□□□ -1
VPS50-201ENST00000251739 SPEF1Q9Y4P9 236 aa8.83□□□□□ -1
VPS50-201ENST00000251739 ZNF726A6NNF4 738 aa8.82□□□□□ -1
VPS50-201ENST00000251739 WNT9BO14905 357 aa8.82□□□□□ -1
VPS50-201ENST00000251739 RAB36O95755 333 aa8.82□□□□□ -1
VPS50-201ENST00000251739 TFP02787 698 aa8.82□□□□□ -1
VPS50-201ENST00000251739 PATE4P0C8F1 98 aa8.82□□□□□ -1
VPS50-201ENST00000251739 PGA4P0DJD7 388 aa8.82□□□□□ -1
VPS50-201ENST00000251739 PGA3P0DJD8 388 aa8.82□□□□□ -1
VPS50-201ENST00000251739 ADORA3P0DMS8 318 aa8.82□□□□□ -1
VPS50-201ENST00000251739 SAGP10523 405 aaPredicted RBP8.82□□□□□ -1
VPS50-201ENST00000251739 ZNF250P15622 560 aa8.82□□□□□ -1
VPS50-201ENST00000251739 CD247P20963 164 aa8.82□□□□□ -1
VPS50-201ENST00000251739 COL8A2P25067 703 aa8.82□□□□□ -1
VPS50-201ENST00000251739 GPR6P46095 362 aaPredicted RBP8.82□□□□□ -1
VPS50-201ENST00000251739 CRYBA2P53672 197 aa8.82□□□□□ -1
VPS50-201ENST00000251739 RBBP4Q09028 425 aa8.82□□□□□ -1
VPS50-201ENST00000251739 SELPLGQ14242 412 aa8.82□□□□□ -1
VPS50-201ENST00000251739 RAB39AQ14964 217 aa8.82□□□□□ -1
VPS50-201ENST00000251739 HIST3H3Q16695 136 aa8.82□□□□□ -1
VPS50-201ENST00000251739 REP15Q6BDI9 236 aa8.82□□□□□ -1
VPS50-201ENST00000251739 RINLQ6ZS11 566 aa8.82□□□□□ -1
VPS50-201ENST00000251739 SLC35D2Q76EJ3 337 aa8.82□□□□□ -1
VPS50-201ENST00000251739 GLCCI1Q86VQ1 547 aa8.82□□□□□ -1
VPS50-201ENST00000251739 SLC22A24Q8N4F4 322 aa8.82□□□□□ -1
VPS50-201ENST00000251739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.82□□□□□ -1
VPS50-201ENST00000251739 SMYD1Q8NB12 490 aa8.82□□□□□ -1
VPS50-201ENST00000251739 C11orf65Q8NCR3 313 aa8.82□□□□□ -1
VPS50-201ENST00000251739 OR4D11Q8NGI4 311 aa8.82□□□□□ -1
VPS50-201ENST00000251739 ZFAND2BQ8WV99 257 aa8.82□□□□□ -1
VPS50-201ENST00000251739 RDH5Q92781 318 aa8.82□□□□□ -1
VPS50-201ENST00000251739 MCHR1Q99705 422 aa8.82□□□□□ -1
VPS50-201ENST00000251739 ZNF275Q9NSD4 429 aaPredicted RBP8.82□□□□□ -1
VPS50-201ENST00000251739 TRRAPQ9Y4A5 3859 aa8.81□□□□□ -1
VPS50-201ENST00000251739 A0A0A6YYJ9 748 aa8.81□□□□□ -1
VPS50-201ENST00000251739 EVPLLA8MZ36 301 aa8.81□□□□□ -1
VPS50-201ENST00000251739 DHHO43323 396 aa8.81□□□□□ -1
VPS50-201ENST00000251739 SERPINI2O75830 405 aa8.81□□□□□ -1
VPS50-201ENST00000251739 VENTXO95231 258 aa8.81□□□□□ -1
VPS50-201ENST00000251739 SNAP29O95721 258 aa8.81□□□□□ -1
VPS50-201ENST00000251739 OPN1SWP03999 348 aa8.81□□□□□ -1
VPS50-201ENST00000251739 MSMBP08118 114 aa8.81□□□□□ -1
VPS50-201ENST00000251739 ASAH2BP0C7U1 165 aa8.81□□□□□ -1
VPS50-201ENST00000251739 OR8G3PP0DMU2 310 aa8.81□□□□□ -1
VPS50-201ENST00000251739 TCN1P20061 433 aaPredicted RBP8.81□□□□□ -1
VPS50-201ENST00000251739 SRP14P37108 136 aaKnown RBP8.81□□□□□ -1
VPS50-201ENST00000251739 ZNF133P52736 654 aaPredicted RBP8.81□□□□□ -1
VPS50-201ENST00000251739 TMEM33P57088 247 aa8.81□□□□□ -1
VPS50-201ENST00000251739 GALK2Q01415 458 aa8.81□□□□□ -1
VPS50-201ENST00000251739 NRN1LQ496H8 165 aa8.81□□□□□ -1
VPS50-201ENST00000251739 AGKQ53H12 422 aa8.81□□□□□ -1
VPS50-201ENST00000251739 ENTPD8Q5MY95 495 aa8.81□□□□□ -1
VPS50-201ENST00000251739 AGBL2Q5U5Z8 902 aa8.81□□□□□ -1
VPS50-201ENST00000251739 DHDDSQ86SQ9 333 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms