RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GTPBP3Q969Y2 492 aaKnown RBP11.12□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF347Q96SE7 839 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 C1QTNF6Q9BXI9 259 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TMEM38BQ9NVV0 291 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 USF3Q68DE3 2245 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TRAV27A0A087WT01 109 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF503-AS2A6NEH8 195 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 CDC42EP2O14613 210 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 DHHO43323 396 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MGRN1O60291 552 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 TRMUO75648 421 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 PDE5AO76074 875 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 FARS2O95363 451 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 T-ENOLP0DO92 83 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ATP6V1B2P21281 511 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 TTKP33981 857 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 CAPZA2P47755 286 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF84P51523 738 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 RPL27P61353 136 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 FHL1Q13642 323 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 PODNL1Q6PEZ8 512 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 TRPM8Q7Z2W7 1104 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MDP1Q86V88 176 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 FBXL14Q8N1E6 418 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MUC15Q8N387 334 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 SLC22A24Q8N4F4 322 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 IL17RDQ8NFM7 739 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 OR4K5Q8NGD3 323 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ASB9Q96DX5 294 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 TRMT61AQ96FX7 289 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 GPX7Q96SL4 187 aaPredicted RBP11.11□□□□□ -0.63
VPREB3-201ENST00000248948 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 FUZQ9BT04 418 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ALG12Q9BV10 488 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MAGIXQ9H6Y5 334 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 DLL4Q9NR61 685 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 CBLN4Q9NTU7 201 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 B3GNT2Q9NY97 397 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 MOKQ9UQ07 419 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ARFGEF3Q5TH69 2177 aa11.11□□□□□ -0.63
VPREB3-201ENST00000248948 ACANP16112 2415 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 TRBV4-1A0A0J9YWV2 114 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 A6NIZ1 184 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 GADD45GO95257 159 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 QDPRP09417 244 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 OR8G3PP0DMU2 310 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 CD99P14209 185 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 FOSL1P15407 271 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 MSX2P35548 267 aaPredicted RBP11.1□□□□□ -0.63
VPREB3-201ENST00000248948 MAGEA2P43356 314 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 OMPP47874 163 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
VPREB3-201ENST00000248948 ATP5J2P56134 94 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 RAP1BP61224 184 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 RAP1AP62834 184 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 SPIBQ01892 262 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 RUNX1T1Q06455 604 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 CD47Q08722 323 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 NPRL3Q12980 569 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
VPREB3-201ENST00000248948 ZBED5Q49AG3 693 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 LRFN4Q6PJG9 635 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 OR4F15Q8NGB8 312 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 OR51A7Q8NH64 312 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 HDAC2Q92769 488 aaKnown RBP11.1□□□□□ -0.63
VPREB3-201ENST00000248948 TSPAN32Q96QS1 320 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 BARX1Q9HBU1 254 aaPredicted RBP11.1□□□□□ -0.63
VPREB3-201ENST00000248948 NOX3Q9HBY0 568 aa11.1□□□□□ -0.63
VPREB3-201ENST00000248948 MTORP42345 2549 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 TCRBV5S2A0A599 114 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 SH3PXD2BA1X283 911 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 H7C417 338 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 DIRAS1O95057 198 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 NDUFB2O95178 105 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 RAB36O95755 333 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CD8AP01732 235 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 HLA-HP01893 362 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CELA3BP08861 270 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CD79AP11912 226 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 BMP4P12644 408 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 APOBEC3AP31941 199 aaPredicted RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 FABP6P51161 128 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 CTXN1P60606 82 aa11.09□□□□□ -0.63
VPREB3-201ENST00000248948 MRPS34P82930 218 aaKnown RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 TRIM25Q14258 630 aaKnown RBP11.09□□□□□ -0.63
VPREB3-201ENST00000248948 LAPTM4AQ15012 233 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms