RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 COA3Q9Y2R0 106 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 FKBP7Q9Y680 259 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 A0A1B0GVC2 190 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 RAD51DO75771 328 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 TNFAIP8O95379 198 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 HLA-DOBP13765 273 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 GNLYP22749 145 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 MTNR1AP48039 350 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 PLAURQ03405 335 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 UNQ6126/PRO20091Q6UXV3 157 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 DOLPP1Q86YN1 238 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 ZC3HAV1LQ96H79 300 aaKnown RBP9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 TSPAN32Q96QS1 320 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 COPS4Q9BT78 406 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 SLC25A19Q9HC21 320 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 NRIP3Q9NQ35 241 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 PLEK2Q9NYT0 353 aa9.9□□□□□ -0.82
TNFAIP3-201ENST00000237289 SH3D21A4FU49 640 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF724A8MTY0 619 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF814B7Z6K7 855 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 PRODHO43272 600 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 NPIPB7O75200 414 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 CAPNS1P04632 268 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 TACSTD2P09758 323 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC17A1Q14916 467 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC18B1Q6NT16 456 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 GLB1L2Q8IW92 636 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 Q8NA96 180 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC37A3Q8NCC5 494 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 CNIH3Q8TBE1 160 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 GPA33Q99795 319 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 GABARAPL3Q9BY60 117 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 CDH20Q9HBT6 801 aa9.9□□□□□ -0.83
TNFAIP3-201ENST00000237289 LIMS1P48059 325 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 GALK2Q01415 458 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ARL9Q6T311 187 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MEPCEQ7L2J0 689 aaKnown RBP9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MRGPRGQ86SM5 289 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SIAH3Q8IW03 269 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 RNF128Q8TEB7 428 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SH3GL3Q99963 347 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLX1AQ9BQ83 275 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 TTYH2Q9BSA4 534 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MROQ9BYG7 248 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 EIF3KQ9UBQ5 218 aaKnown RBP9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 A0A096LPE4 126 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 A0A1W2PPZ6 126 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZAR1LA6NP61 321 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MS4A18H0YCH9 400 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ETV2O00321 342 aaPredicted RBP9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 PTP4A3O75365 173 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 PTHP01270 115 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 PRB1P04280 392 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 H2BFMP0C1H6 154 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 NPR2P20594 1047 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 APLNRP35414 380 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SCRN3Q0VDG4 424 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MS4A18Q3C1V0 323 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 FBXW9Q5XUX1 488 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR7E24Q6IFN5 339 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ASB10Q8WXI3 467 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 PIGMQ9H3S5 423 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 COMMD3-BMI1R4GMX3 469 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 FTCDNL1E5RQL4 147 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 RGS10O43665 173 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 AHCYL1O43865 530 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SEC14L2O76054 403 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 APOL3O95236 402 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC2A10O95528 541 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR8G3PP0DMU2 310 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ATP6V1B1P15313 513 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 C9orf106Q8NAJ2 232 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 FOXB1Q99853 325 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ESPL1Q14674 2120 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 MSR1P21757 451 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ACTC1P68032 377 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ACTA1P68133 377 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 NXNL2Q5VZ03 156 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 ZNF283Q8N7M2 679 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 YIPF7Q8N8F6 280 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 PSD2Q9BQI7 771 aa9.89□□□□□ -0.83
TNFAIP3-201ENST00000237289 A0A1W2PNV4 684 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 PHYHO14832 338 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 SLC16A6O15403 523 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 PRKYO43930 277 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 LYPD3O95274 346 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 TSPAN19P0C672 248 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 FUT4P22083 530 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 PIGFQ07326 219 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 OR4Q3Q8NH05 313 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 IPCEF1Q8WWN9 437 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 LIPHQ8WWY8 451 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 MCHR2Q969V1 340 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 TMEFF2Q9UIK5 374 aaPredicted RBP9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 RNF6Q9Y252 685 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 FRYLO94915 3013 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 LYZL6O75951 148 aa9.88□□□□□ -0.83
TNFAIP3-201ENST00000237289 LAP3P28838 519 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms