RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HLA-DMAP28067 261 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 PPP5CP53041 499 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 NTRK2Q16620 822 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 PRAMEF9Q5VWM5 478 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 HAGHLQ6PII5 290 aaPredicted RBP12.56□□□□□ -0.4
SIX4-201ENST00000216513 FAM53CQ9NYF3 392 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 SEC14L4Q9UDX3 406 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 ENPP5Q9UJA9 477 aa12.56□□□□□ -0.4
SIX4-201ENST00000216513 SOCS6O14544 535 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 GASTP01350 101 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 SLC2A1P11166 492 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TEAD1P28347 426 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 OR4N2Q8NGD1 307 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 ZBTB8AQ96BR9 441 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 ALG14Q96F25 216 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TBCCD1Q9NVR7 557 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 NOTOA8MTQ0 251 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 CTSVO60911 334 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 B3GNT8Q7Z7M8 397 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 GFOD1Q9NXC2 390 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 LAMA4Q16363 1823 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 F5H0A9 414 aaPredicted RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 LGALS8O00214 317 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 GABRA5P31644 462 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 MAP2K3P46734 347 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 HLCSP50747 726 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TUBA1BP68363 451 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TUBA4AP68366 448 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 SPATA46Q5T0L3 261 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 LIPHQ8WWY8 451 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 RASD2Q96D21 266 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 ZMAT3Q9HA38 289 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 EFSO43281 561 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 VAMP5O95183 116 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 EIF4EP06730 217 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 RAB3BP20337 219 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 CNR1P21554 472 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 IL3RAP26951 378 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 PRSS41Q7RTY9 318 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 RBM45Q8IUH3 476 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 C1orf87Q8N0U7 546 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 GJC3Q8NFK1 279 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 NEURL3Q96EH8 262 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 YTHDF1Q9BYJ9 559 aaKnown RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 STEAP1Q9UHE8 339 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 COA3Q9Y2R0 106 aaPredicted RBP12.55□□□□□ -0.4
SIX4-201ENST00000216513 PCDHGB6Q9Y5F9 930 aa12.55□□□□□ -0.4
SIX4-201ENST00000216513 TMEM11P17152 192 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 NT5CQ8TCD5 201 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 CPNE4Q96A23 557 aaPredicted RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 PTTG3PQ9NZH4 202 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 M0R233 179 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 IGFBP1P08833 259 aaPredicted RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 SSTP61278 116 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 EXOSC6Q5RKV6 272 aaKnown RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 TUBA3EQ6PEY2 450 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 H3BMQ9 156 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 PGGHGQ32M88 737 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 MDGA2Q7Z553 956 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 PFN4Q8NHR9 129 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 MAELQ96JY0 434 aaKnown RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 ARL6Q9H0F7 186 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 DUSP22Q9NRW4 184 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 TAS2R3Q9NYW6 316 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 A0A087WZY1 265 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 H7C417 338 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 OR8G3PP0DMU2 310 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 TEKQ02763 1124 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 ST3GAL2Q16842 350 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 RNF170Q96K19 258 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 SDF2Q99470 211 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 FAM60AQ9NP50 221 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 RGPD3A6NKT7 1758 aaPredicted RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 B4GALT1P15291 398 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 LTBRP36941 435 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
SIX4-201ENST00000216513 ZNF718Q3SXZ3 478 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 SLC23A3Q6PIS1 610 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 GDF7Q7Z4P5 450 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms