RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SNX18Q96RF0 628 aa17.8■□□□□ 0.44
RHBDD3-201ENST00000216085 RIBC2Q9H4K1 309 aa17.8■□□□□ 0.44
RHBDD3-201ENST00000216085 TMEFF2Q9UIK5 374 aaPredicted RBP17.8■□□□□ 0.44
RHBDD3-201ENST00000216085 GPR52Q9Y2T5 361 aa17.8■□□□□ 0.44
RHBDD3-201ENST00000216085 CACNA1CQ13936 2221 aa17.8■□□□□ 0.44
RHBDD3-201ENST00000216085 C16orf97H3BN30 126 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 RNF224P0DH78 156 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 ZNF3P17036 446 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 HOXC12P31275 282 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 GIPRP48546 466 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 ZNF84P51523 738 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 RUNX1T1Q06455 604 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 SFRP5Q5T4F7 317 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 OR7E24Q6IFN5 339 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 DNM1P34Q6PK57 102 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 STEAP2Q8NFT2 490 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 PLEKHA8Q96JA3 519 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 SLC38A2Q96QD8 506 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 GABARAPL3Q9BY60 117 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 SLC25A19Q9HC21 320 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 GPR35Q9HC97 309 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 CASQ2O14958 399 aaPredicted RBP17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 MITFO75030 526 aaPredicted RBP17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 QDPRP09417 244 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 HIST1H1CP16403 213 aaKnown RBP17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 IGHV1-2P23083 117 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 PEX2P28328 305 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 GUCA1AP43080 201 aaPredicted RBP17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 TFF3Q07654 80 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 LGALS3BPQ08380 585 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 HIST3H3Q16695 136 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 LRRC36Q1X8D7 754 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 CEACAM16Q2WEN9 425 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 SLC35F1Q5T1Q4 408 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 LEG1Q6P5S2 330 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 C1orf162Q8NEQ5 155 aaPredicted RBP17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 OR52E2Q8NGJ4 325 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 OR4Q3Q8NH05 313 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 OR4K13Q8NH42 304 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 MCHR2Q969V1 340 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 RDH12Q96NR8 316 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 OR10A4Q9H209 315 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 VCX3BQ9H321 246 aa17.79■□□□□ 0.44
RHBDD3-201ENST00000216085 FREM1Q5H8C1 2179 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 LYZL6O75951 148 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 PPP3CBP16298 524 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 UGT2B10P36537 528 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 FAM27E3Q08E93 113 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 NPRL3Q12980 569 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 PTGES3Q15185 160 aaKnown RBP17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 BHLHA15Q7RTS1 189 aaPredicted RBP17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 IQCF1Q8N6M8 205 aa17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 VSX1Q9NZR4 365 aaPredicted RBP17.78■□□□□ 0.44
RHBDD3-201ENST00000216085 SLC22A23A1A5C7 686 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 ZNF99A8MXY4 864 aaPredicted RBP17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 PRSS44E7EML9 344 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 H7C1C5 153 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 DHHO43323 396 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 ITGA5P08648 1049 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 PAICSP22234 425 aaKnown RBP17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 CRABP1P29762 137 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 LCN6P62502 163 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 CDK5Q00535 292 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 C9orf135Q5VTT2 229 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 LPCAT4Q643R3 524 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 STAC2Q6ZMT1 411 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 ZNF433Q8N7K0 673 aaPredicted RBP17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 NMNAT3Q96T66 252 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 SYT4Q9H2B2 425 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 SLC24A3Q9HC58 644 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 CMC2Q9NRP2 79 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 ALPK2Q86TB3 2170 aa17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 SPTAN1Q13813 2472 aaKnown RBP17.77■□□□□ 0.44
RHBDD3-201ENST00000216085 RAD51DO75771 328 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 ATP6V1G2O95670 118 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 PHYHD1Q5SRE7 291 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 C10orf128Q5T292 105 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 OGFRL1Q5TC84 451 aaPredicted RBP17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 KLHL24Q6TFL4 600 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 SSX8Q7RTT4 187 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 WDFY1Q8IWB7 410 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 C17orf78Q8N4C9 275 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 SDR9C7Q8NEX9 313 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC29A1Q99808 456 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 SMPD3Q9NY59 655 aaPredicted RBP17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 NKX1-2Q9UD57 310 aaPredicted RBP17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 NDRG3Q9UGV2 375 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 CDKN2AP42771 156 aaKnown RBP17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 ANKRD16Q6P6B7 361 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 PTCHD4Q6ZW05 846 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 FOXB1Q99853 325 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 ACTR6Q9GZN1 396 aa17.76■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC2A10O95528 541 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF133P52736 654 aaPredicted RBP17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 FMODQ06828 376 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 LRFN4Q6PJG9 635 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 LINGO2Q7L985 606 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 P2RY8Q86VZ1 359 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 GALNT4Q8N4A0 578 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms