RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TBC1D20Q96BZ9 403 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 IL26Q9NPH9 171 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 MYH2Q9UKX2 1941 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 MYH11P35749 1972 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 NTF3P20783 257 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 CSNK1DP48730 415 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 ZNF140P52738 457 aaPredicted RBP9.65□□□□□ -0.87
VCL-201ENST00000211998 MELKQ14680 651 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 PDLIM3Q53GG5 364 aaPredicted RBP9.65□□□□□ -0.87
VCL-201ENST00000211998 IL34Q6ZMJ4 242 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 SLC39A11Q8N1S5 342 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 OR56B1Q8NGI3 324 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 PHYHIPQ92561 330 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 CCDC74AQ96AQ1 378 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 SIDT1Q9NXL6 827 aaKnown RBP9.65□□□□□ -0.87
VCL-201ENST00000211998 IL17CQ9P0M4 197 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 ZNF337Q9Y3M9 751 aa9.65□□□□□ -0.87
VCL-201ENST00000211998 BLACEA4D250 179 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ZNF593O00488 134 aaPredicted RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 MMP2P08253 660 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 IL1RNP18510 177 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 UBE2NP61088 152 aaKnown RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PHOSPHO2Q8TCD6 241 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 RSPRY1Q96DX4 576 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PCDHB10Q9UN67 800 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 A0A0J9YY10 115 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 DRGXA6NNA5 263 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 AP4M1O00189 453 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SLC16A7O60669 478 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 FCGR2CP31995 323 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 OR10A3P58181 314 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SNRPNP63162 240 aaKnown RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 HBG1P69891 147 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 HBG2P69892 147 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 CLEC12BQ2HXU8 276 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 NCMAPQ5T1S8 102 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ZNF620Q6ZNG0 422 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 MBOAT2Q6ZWT7 520 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 USP53Q70EK8 1073 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 FAM24BQ8N5W8 94 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 KLHDC1Q8N7A1 406 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 INTS12Q96CB8 462 aaKnown RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 APOOQ9BUR5 198 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 AUNIPQ9H7T9 357 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 TAS2R5Q9NYW4 299 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 KIR2DS5A0A0G2JLQ3 304 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 A0A0G2JNG1 304 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 A6NLC8 198 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 KIR2DS3K7RE56 304 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 AQP8O94778 261 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 LPLP06858 475 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 NAGAP17050 411 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 KITLGP21583 273 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 BCKDHBP21953 392 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 RFX2P48378 723 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 BIDP55957 195 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SLC7A9P82251 487 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PDE7AQ13946 482 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 HABP2Q14520 560 aaPredicted RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 KIR2DS5Q14953 304 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SCD5Q86SK9 330 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 TTC9Q92623 222 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 CXorf58Q96LI9 332 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 NPAS1Q99742 590 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
VCL-201ENST00000211998 UBQLN3Q9H347 655 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ZNF160Q9HCG1 818 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 MED9Q9NWA0 146 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 MEIKINA0A087WXM9 373 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ZNF727A8MUV8 499 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 C17orf112F2Z3M2 114 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 F5H5K5 113 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 METTL15P1P0C7V9 234 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 GPX2P18283 190 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 KRTDAPP60985 99 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 FOXK2Q01167 660 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 CRMP1Q14194 572 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ZNF542PQ5EBM4 170 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 FBXL6Q8N531 539 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 L3MBTL4Q8NA19 623 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ASB17Q8WXJ9 295 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 TANKQ92844 425 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ARV1Q9H2C2 271 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PLK3Q9H4B4 646 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ANKRD19PQ9H560 264 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 SRPK3Q9UPE1 567 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 PRSS21Q9Y6M0 314 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 ARL2-SNX15V9GYD0 113 aa9.64□□□□□ -0.87
VCL-201ENST00000211998 CDK2AP1O14519 115 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 IGFBP1P08833 259 aaPredicted RBP9.63□□□□□ -0.87
VCL-201ENST00000211998 OR4E1P0C645 316 aa9.63□□□□□ -0.87
VCL-201ENST00000211998 RAB5AP20339 215 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms