RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 WBP1Q96G27 269 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 SPACA5Q96QH8 159 aa15.25■□□□□ 0.03
CTDP1-201ENST00000075430 TMEM82A0PJX8 343 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 OR5H14A6NHG9 310 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 H0YGG7 62 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 OGG1O15527 345 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 HCRTR1O43613 425 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 SLC25A12O75746 678 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 MAOBP27338 520 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 DRD3P35462 400 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 DIO1P49895 249 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 ATP1B3P54709 279 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 ARF3P61204 181 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-201ENST00000075430 BIKQ13323 160 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 C1orf61Q13536 156 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 KLHL26Q53HC5 615 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 FAM71CQ8NEG0 241 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF350Q9GZX5 532 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 HRH4Q9H3N8 390 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 EXOSC3Q9NQT5 275 aaKnown RBP15.24■□□□□ 0.03
CTDP1-201ENST00000075430 SLC22A11Q9NSA0 550 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 KCNG2Q9UJ96 466 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 EDARQ9UNE0 448 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 COL4A3Q01955 1670 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 DNASE2O00115 360 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-201ENST00000075430 PTP4A3O75365 173 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 APBB3O95704 486 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 ZNHIT3Q15649 155 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-201ENST00000075430 C2orf76Q3KRA6 126 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 FIGLAQ6QHK4 219 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 OR2L13Q8N349 312 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 CDRT4Q8N9R6 151 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 FAM83CQ9BQN1 747 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 TRIM2Q9C040 744 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 COMMD4Q9H0A8 199 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 SPACA6W5XKT8 324 aa15.24■□□□□ 0.03
CTDP1-201ENST00000075430 OR2M5A3KFT3 312 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 SLC2A5P22732 501 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 NFYBP25208 207 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 MST1P26927 711 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 CD34P28906 385 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 PLAURQ03405 335 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 CSRP2Q16527 193 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 PNPLA2Q96AD5 504 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GAL3ST4Q96RP7 486 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 SLC17A9Q9BYT1 436 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 PCDHB10Q9UN67 800 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 OR14I1A6ND48 311 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 RNGTTO60942 597 aaKnown RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 IGKV1D-16P01601 117 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 CEACAM5P06731 702 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 OR4E1P0C645 316 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 CXADRP78310 365 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 ETFBKMTQ8IXQ9 262 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 RNF113BQ8IZP6 322 aaKnown RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GVQW1Q8N7I0 195 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 MFSD9Q8NBP5 474 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 THAP6Q8TBB0 222 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 TMED6Q8WW62 240 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 NR4A3Q92570 626 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 CENPMQ9NSP4 180 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 MRM2Q9UI43 246 aaKnown RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 SLC27A6Q9Y2P4 619 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 REV3LO60673 3130 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 LRRK1Q38SD2 2015 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 UNC13CQ8NB66 2214 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 NAP1L6A6NFF2 107 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF98A6NK75 572 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 A8MXK9 166 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 EN2P19622 333 aaPredicted RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GNALP38405 381 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 LSSP48449 732 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 ALKBH1Q13686 389 aaKnown RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GLYATL3Q5SZD4 288 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 NPEPL1Q8NDH3 523 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 PPP1R1CQ8WVI7 109 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GAL3ST3Q96A11 431 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 MIB2Q96AX9 1013 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 COX14Q96I36 57 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 ZNF578Q96N58 590 aaPredicted RBP15.23■□□□□ 0.03
CTDP1-201ENST00000075430 KLHDC3Q9BQ90 382 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 PLA2G2FQ9BZM2 168 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 NRSN2Q9GZP1 204 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 GSKIPQ9P0R6 139 aa15.23■□□□□ 0.03
CTDP1-201ENST00000075430 A0A0B4J2E0 115 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 A0A1B0GX12 115 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 ITGA5P08648 1049 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 FGF2P09038 288 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 AKAIN1P0CW23 69 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 RAB3AP20336 220 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GALP22466 123 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 SRSF3P84103 164 aaKnown RBP15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GFOD2Q3B7J2 385 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 ITPRIPL2Q3MIP1 535 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 MANEAQ5SRI9 462 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 C1QL3Q5VWW1 255 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GLT8D1Q68CQ7 371 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 CBLN3Q6UW01 205 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 TFAP2EQ6VUC0 442 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 OR2W3Q7Z3T1 314 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms