RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CCDC86Q9H6F5 360 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF17P17021 662 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 DPP4P27487 766 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 CAV3P56539 151 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 ROM1Q03395 351 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 GLO1Q04760 184 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 MELKQ14680 651 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 YIF1BQ5BJH7 314 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 HES3Q5TGS1 186 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 STEAP3Q658P3 488 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 JMJD6Q6NYC1 403 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 METAP1DQ6UB28 335 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 DHRS13Q6UX07 377 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 DPY19L4Q7Z388 723 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 MIB2Q96AX9 1013 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 C5orf34Q96MH7 638 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 SOSTQ9BQB4 213 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 ZCCHC4Q9H5U6 513 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 ABCB10Q9NRK6 738 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 MRPL22Q9NWU5 206 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 TTC28Q96AY4 2481 aa12.83□□□□□ -0.36
RTFDC1-201ENST00000023939 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF593O00488 134 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ZIC3O60481 467 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 CBR3O75828 277 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 OR8G3PP0DMU2 310 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 PSMB10P40306 273 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 NANOS3P60323 173 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 POU3F1Q03052 451 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF79Q15937 498 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 PCK2Q16822 640 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 TEX30Q5JUR7 227 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF468Q5VIY5 522 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 HDDC2Q7Z4H3 204 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 KDM8Q8N371 416 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 MAP6Q96JE9 813 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 OR8B4Q96RC9 309 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 SRRQ9GZT4 340 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 SP140LQ9H930 580 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 A0A0G2JK05 382 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 MAGEB3O15480 346 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 NCR1O76036 304 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 PMS2P2O95744 297 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 HRGP04196 525 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC35A1P78382 337 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 FOXK1P85037 733 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 CDC20Q12834 499 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ALKBH1Q13686 389 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 TRIP6Q15654 476 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC18B1Q6NT16 456 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 XKRXQ6PP77 449 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 TMPPEQ6ZT21 453 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 RAB43Q86YS6 212 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 YIPF7Q8N8F6 280 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 GDPD1Q8N9F7 314 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 FAM83FQ8NEG4 500 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 PSMF1Q92530 271 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 PPP1R14BQ96C90 147 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 DIRAS2Q96HU8 199 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 OXGR1Q96P68 337 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 OR5B2Q96R09 309 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 MRPL13Q9BYD1 178 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 KLHL9Q9P2J3 617 aa12.82□□□□□ -0.36
RTFDC1-201ENST00000023939 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 SMIM30A4D0T7 59 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 AQP7P3A6NL99 342 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 MASP2O00187 686 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 RAD1O60671 282 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC19A2O60779 497 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 TMEM127O75204 238 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 KHDRBS3O75525 346 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF432O94892 652 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 ZFPL1O95159 310 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 PTTG1O95997 202 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 PSKH1P11801 424 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 THBS2P35442 1172 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 DLSTP36957 453 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 OR2B6P58173 313 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 SFXN4Q6P4A7 337 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 UEVLDQ8IX04 471 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 OR5M1Q8NGP8 315 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 OR13C5Q8NGS8 318 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 ADAMTS17Q8TE56 1095 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 TXNDC15Q96J42 360 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 UBL7Q96S82 380 aaPredicted RBP12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 PDCD1LG2Q9BQ51 273 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 KCNG2Q9UJ96 466 aa12.81□□□□□ -0.36
RTFDC1-201ENST00000023939 ADAM30Q9UKF2 790 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms