RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ACHEP22303 614 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 APEX1P27695 318 aaKnown RBP13.62□□□□□ -0.23
ERCC1-201ENST00000013807 GALK2Q01415 458 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 RAB39AQ14964 217 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 TRIP10Q15642 601 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 VMACQ2NL98 169 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 MMEL1Q495T6 779 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 DEF8Q6ZN54 512 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 LRP11Q86VZ4 500 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 OR10A6Q8NH74 314 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 LIPHQ8WWY8 451 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 RDH5Q92781 318 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 POLR2J2Q9GZM3 115 aaKnown RBP13.62□□□□□ -0.23
ERCC1-201ENST00000013807 POLR2J3Q9H1A7 115 aaKnown RBP13.62□□□□□ -0.23
ERCC1-201ENST00000013807 C1orf198Q9H425 327 aa13.62□□□□□ -0.23
ERCC1-201ENST00000013807 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
ERCC1-201ENST00000013807 TENM1Q9UKZ4 2725 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 HMGB1P1B2RPK0 211 aaPredicted RBP13.61□□□□□ -0.23
ERCC1-201ENST00000013807 B4DSR2 109 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 LYNX1G3V0Z9 82 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 RNF13O43567 381 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 EDF1O60869 148 aaKnown RBP13.61□□□□□ -0.23
ERCC1-201ENST00000013807 NPPAP01160 153 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 HPXP02790 462 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 MT-ND1P03886 318 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 HIST1H2ABP04908 130 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 LYNX1P0DP58 116 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 PCMT1P22061 227 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 COL8A2P25067 703 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 RBM34P42696 430 aaKnown RBP13.61□□□□□ -0.23
ERCC1-201ENST00000013807 SEC24CP53992 1094 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 LIPNQ5VXI9 398 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 NANOGP8Q6NSW7 305 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 HIST3H2AQ7L7L0 130 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 CALHM3Q86XJ0 350 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 HIST1H2ACQ93077 130 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 SNX18Q96RF0 628 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 TPK1Q9H3S4 243 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 NANOGQ9H9S0 305 aa13.61□□□□□ -0.23
ERCC1-201ENST00000013807 ZNF346Q9UL40 294 aaKnown RBP13.61□□□□□ -0.23
ERCC1-201ENST00000013807 NPIPB13A6NJU9 1138 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 NPIPB4C9JG80 1138 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 FBP2O00757 339 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 RP2O75695 350 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 SERPINI2O75830 405 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
ERCC1-201ENST00000013807 BCL10O95999 233 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 PTHP01270 115 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 IGHG1P01857 330 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
ERCC1-201ENST00000013807 QDPRP09417 244 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 PATE4P0C8F1 98 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 LSP1P33241 339 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 NFYCQ13952 458 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 COQ5Q5HYK3 327 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 C10orf128Q5T292 105 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 GKAP1Q5VSY0 366 aaPredicted RBP13.6□□□□□ -0.23
ERCC1-201ENST00000013807 SLC30A7Q8NEW0 376 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 SLC26A7Q8TE54 656 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 SYT3Q9BQG1 590 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 VIPAS39Q9H9C1 493 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 MRGBPQ9NV56 204 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
ERCC1-201ENST00000013807 ANK2Q01484 3957 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 HTR3EA5X5Y0 456 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 TFP02787 698 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-201ENST00000013807 THRBP10828 461 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 ALDH3B1P43353 468 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 UGT2B15P54855 530 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 CYLC2Q14093 348 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-201ENST00000013807 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 RGS7BPQ6MZT1 257 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-201ENST00000013807 TMEM53Q6P2H8 277 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 HDDC2Q7Z4H3 204 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 OR4K5Q8NGD3 323 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 VANGL1Q8TAA9 524 aaPredicted RBP13.59□□□□□ -0.23
ERCC1-201ENST00000013807 ZNF519Q8TB69 540 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 MCHR2Q969V1 340 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 NMD3Q96D46 503 aaKnown RBP13.59□□□□□ -0.23
ERCC1-201ENST00000013807 SH3GL3Q99963 347 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 DUSP13Q9UII6 198 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 GPR160Q9UJ42 338 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 BAG5Q9UL15 447 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 TANC2Q9HCD6 1990 aa13.59□□□□□ -0.23
ERCC1-201ENST00000013807 A0A0A6YYJ9 748 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 C17orf100A8MU93 164 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 BLOC1S5-TXNDC5H3BN57 136 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 FXYD1O00168 92 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 NCR1O76036 304 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 OR5F1O95221 314 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 FUT1P19526 365 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 RAD52P43351 418 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 GPR6P46095 362 aaPredicted RBP13.58□□□□□ -0.24
ERCC1-201ENST00000013807 UCP2P55851 309 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 LMO4P61968 165 aa13.58□□□□□ -0.24
ERCC1-201ENST00000013807 RUNX1T1Q06455 604 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms