RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 SnrpnP63163 240 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Fut7Q11131 389 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr616Q3KPB0 317 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ift52Q62559 426 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Adam6bQ6IMH7 756 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Kctd12Q6WVG3 327 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr1148Q7TR35 314 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Znf787Q8BIF9 381 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Csnk1a1Q8BK63 337 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Mbnl3Q8R003 342 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr1336Q8VGH5 314 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 DcxrQ91X52 244 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Q9CPZ3 230 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Twsg1Q9EP52 222 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ncoa1P70365 1447 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ssxb8B1AY40 170 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm7849D3YX03 116 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Fbxw25F7C9P2 466 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Vmn2r66K7N6R9 851 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm3512L7N206 146 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 AldocP05063 363 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 FblP35550 327 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Trav8d-2Q5R1B6 112 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Dyrk2Q5U4C9 599 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Laptm4aQ60961 233 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Pced1bQ8BGX1 433 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Rdh12Q8BYK4 316 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Trub1Q8C0D0 338 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Cmtm4Q8CJ61 208 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Lyrm2Q8R033 88 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Emc4Q9CZX9 183 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ankrd39Q9D2X0 183 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ankrd7Q9D504 279 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Rpl7l1Q9D8M4 246 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ptges3lQ9D9A7 131 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Wdr61Q9ERF3 305 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Aox2Q5SGK3 1345 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr310B2RVZ1 332 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm21970F6XX07 295 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr694K7N641 315 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Vmn2r28L7N203 852 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Atp1b2P14231 290 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm10750Q3V0I0 133 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Dll1Q61483 722 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Duxbl2Q7TNE6 350 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Mrps35Q8BJZ4 320 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Rcc2Q8BK67 520 aaKnown RBP8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 SuoxQ8R086 546 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Slc29a4Q8R139 528 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Golga7Q91W53 137 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Chrdl1Q920C1 447 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 AadacQ99PG0 398 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Slc5a5Q99PN0 618 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Dcaf6Q9DC22 876 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Sertad3Q9ERC3 197 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Opn3Q9WUK7 400 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Mst1rQ62190 1378 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 H2al1jA2BFR3 109 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Enpp7D3Z6V6 446 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Vmn1r174E9PYW5 313 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Bak1O08734 209 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 CdaP56389 146 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Bloc1s3Q5U5M8 195 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 ScapQ6GQT6 1276 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Opn5Q6VZZ7 377 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Prss54Q7M756 383 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Adamtsl4Q80T21 1036 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 H2-M10.3Q85ZW6 330 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 SynbQ8BI41 618 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Tbc1d17Q8BYH7 645 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gpr18Q8K1Z6 331 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Slc41a3Q921R8 488 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Vmn1r172Q9EPS4 313 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Tas2r119Q9JKT2 335 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Adgra3Q7TT36 1310 aa8.28□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Tcrg-V5A0A0G2JGV5 113 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm45808A0A1B0GSH8 263 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Zfp978A2A7I1 335 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Rex2A2AWF2 685 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr225E9PWF9 419 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Lrrc31F6VYM1 502 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Gm7694J3QNH8 270 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 TspearJ3S6Y1 670 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Igsf6P0C6B7 237 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Cdk4P30285 303 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr1442Q0VEV7 312 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr733Q14AK5 308 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Tmem253Q3UNB8 204 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Slc5a6Q5U4D8 634 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 GypcQ78HU7 95 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr1026Q7TR90 307 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Mmp21Q8K3F2 568 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Olfr357Q8VFP4 308 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ciao1Q99KN2 339 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Dnase2bQ9QY48 354 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Mroh6V9GX81 722 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Aox3G3X982 1335 aa8.27□□□□□ -1.08
Clcn3-202ENSMUST00000056508 Ncoa2Q61026 1462 aa8.27□□□□□ -1.09
Clcn3-202ENSMUST00000056508 Pcdh7A0A0A6YY83 1255 aa8.27□□□□□ -1.09
Clcn3-202ENSMUST00000056508 Gm36864A0A1Y7VJE6 447 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms