RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Dlx2P40764 332 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cdh26P59862 763 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 SnrpgP62309 76 aaKnown RBP15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1500Q7TQQ3 311 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 HeltQ7TS99 240 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Timm29Q8BGX2 266 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 NanpQ9CPT3 248 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 B3gat1Q9CW73 334 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc23a2Q9EPR4 648 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp442A2AQA0 667 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm19965J3QNY8 723 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 5730507C01RikJ3QPX0 416 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr597L7N224 315 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Drd4P51436 387 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gabrr1P56475 480 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btg1P62325 171 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mdga1Q0PMG2 940 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm10330Q8BKS1 112 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1449Q8VEV8 314 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Etv5Q9CXC9 510 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1291-ps1A0A286YE47 326 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Dnttip1Q99LB0 328 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp735B1ARH2 734 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cldn34b4Q3V0X2 211 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 C2cd4bQ80XU5 340 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rdh1Q8CGV4 317 aa15.47■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1532-ps1A0A0R4J8U2 307 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ms4a7E9Q9V5 267 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr707K7N662 307 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Scgb1a1Q06318 96 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 CdonQ32MD9 1250 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Taf9bQ6NZA9 249 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fbxo5Q7TSG3 421 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp955aQ80XR7 545 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mboat2Q8R3I2 519 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 GcaQ8VC88 220 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr161Q8VGB9 313 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Scp2d1Q9DAH1 156 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cldn6Q9Z262 219 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f16A0A087WSN2 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hax1O35387 280 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Eef1a1P10126 462 aaKnown RBP15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cuzd1P70412 606 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mgat2Q921V5 442 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc22a17Q9D9E0 401 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 RlimQ9WTV7 600 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r122K7N726 305 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Plpp5Q3UMZ3 260 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Sirpb1bA0A0A6YXN8 397 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cd101A8E0Y8 1033 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr115B2RTB9 312 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Sirpb1cK7N6K7 397 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1360K9J6X0 313 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 IfnabL7MTU6 190 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1359Q7TQU5 313 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Q8BHR8 331 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Elovl7Q9D2Y9 281 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ak4Q9WUR9 223 aaKnown RBP15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Asb3Q9WV72 525 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Nkx6-2D3Z4R4 277 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 GipP48756 144 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ctdsp2Q8BX07 270 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Frs2Q8C180 508 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 ClcnkaQ9WUB7 687 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Wdr81Q5ND34 1934 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f15A0A087WR44 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f12A0A0A0MQP3 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f9A2BFZ7 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f7A2BHG6 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f19A2CG71 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f10A2CG92 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f3A2CGC2 496 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f13B8JKF6 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn2r106E9PY92 862 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn2r108E9PYS0 855 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f2J3QMS5 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f25J3QMV9 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f6J3QMW9 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f26J3QNK2 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f24J3QNQ5 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f8J3QQ50 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f17L7MU81 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f18L7MU83 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f14Q1LZI5 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc22a14Q497L9 629 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Btbd35f27Q5FWA1 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Slc25a21Q8BZ09 298 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 D2hgdhQ8CIM3 535 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Adgrg3Q8R0T6 542 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 GMCL1P1Q99N64 498 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Csnk1dQ9DC28 415 aa15.46■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 AlyrefO08583 255 aaKnown RBP15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Neurog1P70660 244 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Otx2P80206 289 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Dnajc4Q9D844 244 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 RgrQ9Z2B3 291 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 C4bpaP08607 469 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Eif1P48024 113 aaKnown RBP15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Trmt12Q8BG71 446 aa15.46■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cyc1Q9D0M3 325 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms