RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Peli1Q8C669 418 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr569Q8VGZ2 314 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 TardbpQ921F2 414 aaKnown RBP10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Thumpd1Q99J36 350 aaKnown RBP10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cav2Q9WVC3 162 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cd163l1A0A1B0GSB0 991 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm11634A0A1B0GSX1 172 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1109A2AT96 312 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm4788E9Q8B5 879 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm16434J3QN10 205 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm3685J3QPP2 205 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Bpifa2P07743 235 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tbxa2rP30987 341 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ccl9P51670 122 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ctnnb1Q02248 781 aaKnown RBP10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Dtx3lQ3UIR3 748 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Man1c1Q6NXK9 625 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr645Q7TRQ1 315 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Plcz1Q8K4D7 647 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr648Q8VG19 316 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 C1qtnf2Q9D8U4 294 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Mfsd1Q9DC37 464 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 CalyQ9DCA7 226 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4930563M21RikA0A1L1SUT5 578 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm5788A0A1Y7VK80 144 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm20518E9Q548 580 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Zfp820E9Q5G8 549 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Vmn1r55E9Q8I6 310 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 E030030I06RikJ3QML9 246 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01631 113 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 S100a13P97352 98 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Milr1Q3TB92 246 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Foxred1Q3TQB2 487 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Adam9Q61072 845 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc35f2Q7TML3 375 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 HeltQ7TS99 240 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gpc2Q8BKV1 579 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 MastlQ8C0P0 865 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Nsun3Q8CCT7 348 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Rnf208Q8K0W3 265 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Hcfc1r1Q9CYQ5 120 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc7a11Q9WTR6 502 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm3854A0A1B0GSS6 495 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Vmn2r49D3Z6L3 852 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01675 107 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01676 107 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01677 107 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01678 107 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Capza2P47754 286 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cdh26P59862 763 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Klhl9Q6ZPT1 617 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Mtnr1bQ8CIQ6 364 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1389Q8VGX0 311 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gimap3Q99MI6 301 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Mtif3Q9CZD5 276 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Pga5Q9D106 387 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tmem35aQ9D328 167 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tmem176aQ9DCS1 244 aa10.44□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4933408B17RikG3X9B4 273 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Smim22J3QP37 91 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Klk1P15947 261 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 CdaP56389 146 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 RgmaQ6PCX7 454 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Znf770Q8BIQ8 705 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sdhaf2Q8C6I2 164 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr134Q8VG95 312 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cep41Q99NF3 373 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Med30Q9CQI9 178 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Trappc2Q9CQP2 140 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Scn5aQ9JJV9 2019 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Hacd4A2AKM2 232 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm13271B1AYH9 182 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Nkx6-2D3Z4R4 277 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Sult2a4L7N245 285 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Hsd17b12O70503 312 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 P01878 344 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 CpoxP36552 443 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ufd1P70362 307 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Ikzf2P81183 526 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 SlbpP97440 275 aaKnown RBP10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tdpoz5Q6YCH1 340 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr517Q7TRU4 314 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr290Q7TS13 315 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 C8bQ8BH35 589 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 ArsjQ8BM89 598 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cuedc1Q8R3V6 388 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr478Q8VG04 314 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Dnaja3Q99M87 480 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 4933400A11RikQ9CR52 288 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Trim2Q9ESN6 744 aaKnown RBP10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 SclyQ9JLI6 432 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Pde7bQ9QXQ1 446 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Pmm2Q9Z2M7 242 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Olfr1432A0A140LHS7 346 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Tmsb15aA2AEH9 79 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Gm10799F7C7U2 104 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Slc16a5G5E8K6 468 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 EmdO08579 259 aaKnown RBP10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 PtgdsO09114 189 aa10.43□□□□□ -0.74
Topbp1-201ENSMUST00000035164 Cldn4O35054 210 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms