RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 PpieQ9QZH3 301 aaKnown RBP16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Ighv1-13A0A075B5I0 98 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 PrnA0A075B668 197 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Igkv9-123A0A140T8N8 117 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tmem178bM0QWJ9 172 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Ly6dP35459 127 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Mapk14P47811 360 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Opa3Q505D7 179 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Vmn1r196Q5SVD5 301 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 CmahQ61419 577 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Cd55Q61475 390 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Olfr1134Q7TR43 312 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 HeltQ7TS99 240 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 ShfQ8CG80 238 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tmem242Q8VCR3 140 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Olfr1143Q8VEU8 314 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Olfr644Q8VH21 314 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Clint1Q99KN9 631 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tprg1lQ9DBS2 266 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Sorcs1Q9JLC4 1167 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 PrndQ9QUG3 179 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Htr6Q9R1C8 440 aa16.79■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Gm45711E0CXA2 391 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Gm21820J3KMU2 361 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Lin7bO88951 207 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 ChrndP02716 520 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tmprss9P69525 1065 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Slc16a11Q5NC32 447 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tha1Q6XPS7 400 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 H2-M10.5Q85ZW7 330 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Nkd2Q8VE28 461 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Itfg2Q91WI7 443 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Yipf2Q99LP8 312 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 AspnQ99MQ4 373 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Q9CRW3 126 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Chchd2Q9D1L0 153 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Cldnd2Q9D9H2 167 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Stra6lQ9DBN1 621 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 6430628N08RikA0A0U1RQ45 177 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Olfr152G3X9L8 316 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Gstm2P15626 218 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Fcgr1P26151 404 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Rpl18P35980 188 aaKnown RBP16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Ca10P61215 328 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Ube2iP63280 158 aaKnown RBP16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 N6amt1Q6SKR2 214 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Lrrc75aQ7TSF4 339 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Nudt9Q8BVU5 350 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Q8C784 167 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tmem198bQ8CFU0 350 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Olfr870Q8VGG4 311 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Eps8l3Q91WL0 600 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Q99K99 313 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Raf1Q99N57 648 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Tex33Q9D9J2 266 aa16.78■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Clip3B9EHT4 547 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Btbd8D3YUB6 377 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 4930595D18RikD3Z642 64 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Emc8O70378 207 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 PitpnbP53811 271 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Gpr119Q7TQP3 335 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Lpar4Q8BLG2 370 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Dzank1Q8C008 778 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Ccdc115Q8VE99 180 aaKnown RBP16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Cdhr1Q8VHP6 859 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Cdc42ep1Q91W92 409 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Slco1b2Q9JJL3 689 aa16.77■□□□□ 0.28
Ccdc3-201ENSMUST00000027988 Gm13102A2ASJ3 519 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Trabd2bB1ATG9 517 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Tmem229aB9EJI9 371 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Vmn2r101E9PZS9 857 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Cyp4a10O88833 509 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Gpr52P0C5J4 361 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Pou3f1P21952 449 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Hoxc4Q08624 264 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 NfkbidQ2TB02 327 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 D17Wsu92eQ3TT38 291 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Mmp25Q3U435 615 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Gm9758Q80ZT2 255 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 C1sbQ8CFG8 688 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Akr7a2Q8CG76 367 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Babam2Q8K3W0 383 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Fam3bQ9D309 235 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 4930503E14RikQ9D583 177 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Ift22Q9DAI2 185 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Qtrt1Q9JMA2 403 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Col4a2P08122 1707 aa16.77■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Atg2bQ80XK6 2075 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 HelzQ6DFV5 1964 aaKnown RBP16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Omt2aF6ZJR3 104 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Slc16a7O70451 484 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Kcnj15O88932 375 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Cd48P18181 240 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 HexaP29416 528 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Uba1yP31254 1058 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 PtgirP43252 415 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Acta2P62737 377 aaKnown RBP16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Actg2P63268 376 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 S100gP97816 79 aa16.76■□□□□ 0.27
Ccdc3-201ENSMUST00000027988 Csn1s2aQ02862 184 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms