RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SGCBQ16585 318 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 RSPO4Q2I0M5 234 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TMEM176BQ3YBM2 270 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 SLC25A53Q5H9E4 307 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 LCN1P1Q5VSP4 162 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TIGD3Q6B0B8 471 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MZT2AQ6P582 158 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 PAQR6Q6TCH4 344 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF322Q6U7Q0 402 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NCCRP1Q6ZVX7 275 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 GDPD3Q7L5L3 318 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 LHFPL3Q86UP9 236 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 GALNT16Q8N428 558 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 LRRC75AQ8NAA5 344 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 IL17RDQ8NFM7 739 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 OR10H4Q8NGA5 316 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 OR51L1Q8NGJ5 315 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 OR6K6Q8NGW6 343 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MFSD8Q8NHS3 518 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TM9SF4Q92544 642 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 PTP4A1Q93096 173 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TRMT61AQ96FX7 289 aaKnown RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ARL5BQ96KC2 179 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 FRMD6Q96NE9 622 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TSPAN32Q96QS1 320 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 UBL7Q96S82 380 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 GPX7Q96SL4 187 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NMNAT3Q96T66 252 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TBX5Q99593 518 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 POTEKPQ9BYX7 375 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 SLC22A4Q9H015 551 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 RERGLQ9H628 205 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 PROK2Q9HC23 129 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 NRIP3Q9NQ35 241 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ERVK13-1Q9NX77 482 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MRPL39Q9NYK5 338 aaKnown RBP7.97□□□□□ -1.13
PHGDH-219ENST00000641513 TBC1D24Q9ULP9 559 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 MED12Q93074 2177 aa7.97□□□□□ -1.13
PHGDH-219ENST00000641513 ARPC4-TTLL3A0A0A6YYG9 625 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 A0A1W2PNR3 127 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 DAPL1A0PJW8 107 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 OR6C68A6NDL8 312 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 CCDC182A6NF36 153 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 TRABD2BA6NFA1 517 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 NPIPA5E9PKD4 350 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 H7C1C5 153 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 PLPP3O14495 311 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 IMPA2O14732 288 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 RGS13O14921 159 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 EFNA2O43921 213 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 ATP6V1G1O75348 118 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 AKR7A3O95154 331 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 CDRT1O95170 752 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 WDPCPO95876 746 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 CNR1P21554 472 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 GDF1P27539 372 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 PYCR1P32322 319 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 CENPAP49450 140 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 MAP2K6P52564 334 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 DLX5P56178 289 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 LCN6P62502 163 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 FOXC1Q12948 553 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 HNRNPA0Q13151 305 aaKnown RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 MYBPHQ13203 477 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 PON3Q15166 354 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 OR1C1Q15619 314 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 NDUFA5Q16718 116 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 HACD4Q5VWC8 232 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 GPR139Q6DWJ6 353 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SPINK14Q6IE38 97 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 IGF2-ASQ6U949 168 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 H1FNTQ75WM6 255 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 YRDCQ86U90 279 aaKnown RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 TPRA1Q86W33 373 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SNX29P2Q8IUI4 249 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 LAX1Q8IWV1 398 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 UBQLNLQ8IYU4 475 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 KDM8Q8N371 416 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 ACBD7Q8N6N7 88 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 TEX19Q8NA77 164 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 OR6S1Q8NH40 331 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SLC25A43Q8WUT9 341 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 THAP4Q8WY91 577 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SLC39A7Q92504 469 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 HPS1Q92902 700 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 NXPE2Q96DL1 559 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 ZMYND19Q96E35 227 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SIGLEC12Q96PQ1 595 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SNX18Q96RF0 628 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 TEAD3Q99594 435 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 KCNS3Q9BQ31 491 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 MIXL1Q9H2W2 232 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 CHST11Q9NPF2 352 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 RPRD1BQ9NQG5 326 aaKnown RBP7.96□□□□□ -1.14
PHGDH-219ENST00000641513 SNTG1Q9NSN8 517 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 ALKBH4Q9NXW9 302 aa7.96□□□□□ -1.14
PHGDH-219ENST00000641513 TAS2R5Q9NYW4 299 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms