RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RUFY3Q7L099 469 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 TGIF2LXQ8IUE1 241 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 NUDCD3Q8IVD9 361 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 CCDC65Q8IXS2 484 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 MYOCDQ8IZQ8 938 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 ACOT11Q8WXI4 607 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-216ENST00000640058 ASB9Q96DX5 294 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 CMTM7Q96FZ5 175 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 C12orf42Q96LP6 360 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 TMEM246Q9BRR3 403 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 GCOM2Q9BZD3 368 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-216ENST00000640058 RANBP3Q9H6Z4 567 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-216ENST00000640058 GIN1Q9NXP7 522 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 HOXC10Q9NYD6 342 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 BFARQ9NZS9 450 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 CLCF1Q9UBD9 225 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 KCNIP3Q9Y2W7 256 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 NPTNQ9Y639 398 aa2.35□□□□□ -2.03
CCDC7-216ENST00000640058 HAS3O00219 553 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 OR7A10O76100 309 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 FGF1P05230 155 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 KLK3P07288 261 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 DCNP07585 359 aaKnown RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 MUC1P15941 1255 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 CELP19835 753 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 MX1P20591 662 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 BTCP35070 178 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 FDFT1P37268 417 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 UBE2AP49459 152 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 GPM6AP51674 278 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 SCRN3Q0VDG4 424 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 BST1Q10588 318 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 PPIL2Q13356 520 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 PLD1Q13393 1074 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 GK3PQ14409 553 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 KIAA0087Q14695 138 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 TMEM255AQ5JRV8 349 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 ZNF546Q86UE3 836 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 PSTKQ8IV42 348 aaKnown RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 MMAAQ8IVH4 418 aaKnown RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 ARRDC1Q8N5I2 433 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 FAM86B1Q8N7N1 296 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 SYNPRQ8TBG9 265 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 BMFQ96LC9 184 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 CNN2Q99439 309 aaKnown RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 NDFIP1Q9BT67 221 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 RIOK2Q9BVS4 552 aaKnown RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 RNF167Q9H6Y7 350 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 METTL7AQ9H8H3 244 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 NT5MQ9NPB1 228 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 MARCOQ9UEW3 520 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-216ENST00000640058 HPCAL4Q9UM19 191 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 SLC25A15Q9Y619 301 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 IKBKGQ9Y6K9 419 aa2.34□□□□□ -2.03
CCDC7-216ENST00000640058 FANCIQ9NVI1 1328 aa2.34□□□□□ -2.04
CCDC7-216ENST00000640058 ARHGEF35A5YM69 484 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 BTBD17A6NE02 478 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 CCDC182A6NF36 153 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 GOLGA8SH3BPF8 625 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 BET1O15155 118 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 C1orf105O95561 183 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 SERPINA3P01011 423 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 IGLV2-23P01705 113 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 SSR1P43307 286 aaKnown RBP2.33□□□□□ -2.04
CCDC7-216ENST00000640058 CRYBB2P43320 205 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 MRPL28Q13084 256 aaKnown RBP2.33□□□□□ -2.04
CCDC7-216ENST00000640058 CYTH1Q15438 398 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 MARCH8Q5T0T0 291 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 Q6ZN92 141 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 CDR2LQ86X02 465 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-216ENST00000640058 ECHDC2Q86YB7 292 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 MCOLN3Q8TDD5 553 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 ZFP90Q8TF47 636 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 PYROXD1Q8WU10 500 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 TUBGCP3Q96CW5 907 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 PANX2Q96RD6 677 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 ACTR6Q9GZN1 396 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 PPA2Q9H2U2 334 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 SRMSQ9H3Y6 488 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 ZFP14Q9HCL3 533 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 IL26Q9NPH9 171 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 ZNF629Q9UEG4 869 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-216ENST00000640058 SUN2Q9UH99 717 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 PCM1Q15154 2024 aa2.33□□□□□ -2.04
CCDC7-216ENST00000640058 IGLV3-22A0A075B6J6 115 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 XKRY2A2RUG3 117 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 RBMY1BA6NDE4 496 aaKnown RBP2.32□□□□□ -2.04
CCDC7-216ENST00000640058 RBMY1EA6NEQ0 496 aaKnown RBP2.32□□□□□ -2.04
CCDC7-216ENST00000640058 H0Y8G0 127 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 MPHOSPH10O00566 681 aaKnown RBP2.32□□□□□ -2.04
CCDC7-216ENST00000640058 UPK3AO75631 287 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 TMEM50AO95807 157 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 NDUFB10O96000 172 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 IGKV4-1P06312 121 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 CRYGBP07316 175 aa2.32□□□□□ -2.04
CCDC7-216ENST00000640058 RBMY1DP0C7P1 496 aaKnown RBP2.32□□□□□ -2.04
CCDC7-216ENST00000640058 RBMY1A1P0DJD3 496 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms