RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 A8MUI8 341 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ANGPTL7O43827 346 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 SLC25A27O95847 323 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ALPPP05187 535 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 CCDC130P13994 396 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 FDFT1P37268 417 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ZNF138P52744 262 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 RPS11P62280 158 aaKnown RBP eCLIP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 SCN1BQ07699 218 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TFDP1Q14186 410 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MAD2L1BPQ15013 274 aaPredicted RBP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TSC22D1Q15714 1073 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TMEM183BQ1AE95 376 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TEX44Q53QW1 395 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 SOHLH1Q5JUK2 328 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MRPL2Q5T653 305 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 SPINT4Q6UDR6 99 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 KRTAP8-1Q8IUC2 63 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TMEM183AQ8IXX5 376 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MS4A15Q8N5U1 240 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 NPWQ8N729 165 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 CCDC63Q8NA47 563 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 OR56B4Q8NH76 319 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 LMX1AQ8TE12 382 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MRPS31Q92665 395 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MARC2Q969Z3 335 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 DUS3LQ96G46 650 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 CDKN2AIPNLQ96HQ2 116 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 CEP170P1Q96L14 293 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 RAB34Q9BZG1 259 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ISYNA1Q9NPH2 558 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 BCCIPQ9P287 314 aaKnown RBP eCLIP-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MGAT4AQ9UM21 535 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 HTTP42858 3142 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 ALPK3Q96L96 1907 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 TSC2P49815 1807 aa-0.36□□□□□ -2.47
CCDC7-215ENST00000639629 MPDZO75970 2070 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 A0A0U1RRA0 63 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 A0A1B0GVI7 797 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ZNF726A6NNF4 738 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 E7EQL1 145 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 IPO8O15397 1037 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 LRRTM2O43300 516 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 SEMA3DO95025 777 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 NAPSAO96009 420 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 RLN1P04808 185 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 PLEKP08567 350 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 GNAO1P09471 354 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ZNF18P17022 549 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ATF6P18850 670 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ID1P41134 155 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 P2RY1P47900 373 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 EMP2P54851 167 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 PRDX4Q13162 271 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 SNX1Q13596 522 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ZNF181Q2M3W8 571 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ACOT7LQ6ZUV0 252 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CENPUQ71F23 418 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 RABEPKQ7Z6M1 372 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 FAM71AQ8IYT1 594 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CLDN19Q8N6F1 224 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 TMEM104Q8NE00 496 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 APPL2Q8NEU8 664 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 OR51G1Q8NGK1 321 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ZNF563Q8TA94 476 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CIRBP-AS1Q8TBR5 109 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 C15orf40Q8WUR7 153 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 UCMAQ8WVF2 138 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 RNF157Q96PX1 679 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CCT7Q99832 543 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 FAM213AQ9BRX8 229 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 NDFIP1Q9BT67 221 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 RPAP3Q9H6T3 665 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 NOX3Q9HBY0 568 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 TDRKHQ9Y2W6 561 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 DNAH14Q0VDD8 3507 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 ERVK-7P63135 1459 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 TOPBP1Q92547 1522 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 LRRC7Q96NW7 1537 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 EML5Q05BV3 1969 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 IGKV1OR2-108A0A075B7D4 117 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 IGHV3OR16-9A0A0B4J2B5 98 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 IGKV1D-13A0A0B4J2D9 117 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 TUBAL3A6NHL2 446 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 C11orf98E9PRG8 122 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 TLR4O00206 839 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CACNB4O00305 520 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 GIMD1P0DJR0 217 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 IGKV1-13P0DP09 117 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 FUT1P19526 365 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 HMGCLP35914 325 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 PPM1FP49593 454 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 NOVA1P51513 510 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CCR6P51684 374 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 CAPZA1P52907 286 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 BCL2L1Q07817 233 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 C17orf67Q0P5P2 114 aa-0.37□□□□□ -2.47
CCDC7-215ENST00000639629 RILPL1Q5EBL4 403 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms