RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SIAH3Q8IW03 269 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SH3BGRL2Q9UJC5 107 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 NXT1Q9UKK6 140 aaKnown RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CXorf51AA0A1B0GTR3 108 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CD63P08962 238 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 HOXB5P09067 269 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 OR8U9P0C7N5 309 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 BDKRB2P30411 391 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 FGL2Q14314 439 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 GALEQ14376 348 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 AGAP7PQ5VUJ5 663 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 HAGHLQ6PII5 290 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 ESX1Q8N693 406 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 TP53I13Q8NBR0 393 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SSX5O60225 188 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 PEX14O75381 377 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SOX18P35713 384 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SLC35A1P78382 337 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SLC36A2Q495M3 483 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 EXOSC6Q5RKV6 272 aaKnown RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 MOB3CQ70IA8 216 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 H1FNTQ75WM6 255 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 DCLRE1CQ96SD1 692 aaKnown RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 GALNT9Q9HCQ5 603 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 IFNA5P01569 189 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 TNK1Q13470 666 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 PRSS41Q7RTY9 318 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 RDH10Q8IZV5 341 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 DYNC2LI1Q8TCX1 351 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SLC25A46Q96AG3 418 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 PAPOLGQ9BWT3 736 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 EHFQ9NZC4 300 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 CHRNA9Q9UGM1 479 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 A3GALT2U3KPV4 340 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 H7C2Y5 167 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 FCGR2AP12318 317 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 DLSTP36957 453 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 MEF2DQ14814 521 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 ACKR1Q16570 336 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 MKXQ8IYA7 352 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 DVL3Q92997 716 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SLC35B4Q969S0 331 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 CDCP1Q9H5V8 836 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 CGGBP1Q9UFW8 167 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 TMPRSS11EQ9UL52 423 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 CAMK2AQ9UQM7 478 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 A0A1W2PNR3 127 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 EIF4E2O60573 245 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 ICOSLGO75144 302 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SLC43A1O75387 559 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 EPHA1P21709 976 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 P2RX1P51575 399 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 PSPHP78330 225 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 ETFBKMTQ8IXQ9 262 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 CPT1CQ8TCG5 803 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 PCNPQ8WW12 178 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 MIB2Q96AX9 1013 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 PLA2G12AQ9BZM1 189 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 WIF1Q9Y5W5 379 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 TSPAN11A1L157 253 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SMCO3A2RU48 225 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 TCRBP04435 133 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SPI1P17947 270 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 KIRREL2Q6UWL6 708 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 SLC16A9Q7RTY1 509 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 OPALINQ96PE5 141 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
SCARB2-208ENST00000638372 POMT2Q9UKY4 750 aa13.15□□□□□ -0.3
SCARB2-208ENST00000638372 A0A087WV62 115 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 HOXB9P17482 250 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 FAM53BQ14153 422 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 POU4F3Q15319 338 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SLC9A3R2Q15599 337 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 TRAPPC6BQ86SZ2 158 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 OR9K2Q8NGE7 335 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 LRRC61Q9BV99 259 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-208ENST00000638372 AGPAT2O15120 278 aa13.14□□□□□ -0.31
SCARB2-208ENST00000638372 DNAJB6O75190 326 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms