RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 INSM1Q01101 510 aaPredicted RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 MRPL28Q13084 256 aaKnown RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 GPR176Q14439 515 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 CPEB2Q7Z5Q1 589 aaKnown RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 WDR5BQ86VZ2 330 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 LGALS14Q8TCE9 139 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 HAVCR2Q8TDQ0 301 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 SLC7A6Q92536 515 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 ANKRD10Q9NXR5 420 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 MED11Q9P086 117 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 PDCD5O14737 125 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 Q499Y3 187 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 HES5Q5TA89 166 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 BICRALQ6AI39 1079 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 C5orf46Q6UWT4 87 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 LRRC69Q6ZNQ3 347 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 OR2I1PQ8NGU4 316 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 OTOSQ8NHW6 89 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 NSMAFQ92636 917 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 EDAQ92838 391 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 NAT6Q93015 286 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 AMELYQ99218 206 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 SPSB2Q99619 263 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 ABCG5Q9H222 651 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 MOV10Q9HCE1 1003 aaKnown RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 DDX28Q9NUL7 540 aaKnown RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 OCIAD1Q9NX40 245 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 MRPS7Q9Y2R9 242 aaKnown RBP19.4■□□□□ 0.7
CLN6-224ENST00000638076 N6AMT1Q9Y5N5 214 aa19.4■□□□□ 0.7
CLN6-224ENST00000638076 VPS13AQ96RL7 3174 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 C19orf67A6NJJ6 358 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 SLC16A7O60669 478 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 SLC43A1O75387 559 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ITGA10O75578 1167 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 UBL3O95164 117 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 IL11P20809 199 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 MELKQ14680 651 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 PHF19Q5T6S3 580 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ARSKQ6UWY0 536 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ST8SIA1Q92185 356 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 CTRCQ99895 268 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 MARVELD1Q9BSK0 173 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 CRB3Q9BUF7 120 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 MRPL39Q9NYK5 338 aaKnown RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 VSX1Q9NZR4 365 aaPredicted RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 VDAC3Q9Y277 283 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 IFITM5A6NNB3 132 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 FTCDNL1E5RQL4 147 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ZNF593O00488 134 aaPredicted RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 SOX2P48431 317 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 SRP9P49458 86 aaKnown RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 NCCRP1Q6ZVX7 275 aaPredicted RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 KRT74Q7RTS7 529 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 KDM8Q8N371 416 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 OR2G2Q8NGZ5 317 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ZNF486Q96H40 463 aaPredicted RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 DMRTB1Q96MA1 342 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 ZFP3Q96NJ6 502 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 SNX18Q96RF0 628 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 SLCO1C1Q9NYB5 712 aa19.39■□□□□ 0.69
CLN6-224ENST00000638076 PCDHGA9Q9Y5G4 932 aaKnown RBP19.39■□□□□ 0.69
CLN6-224ENST00000638076 AIPO00170 330 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 PHYHO14832 338 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 IGHMP01871 453 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 AGFG1P52594 562 aaKnown RBP19.38■□□□□ 0.69
CLN6-224ENST00000638076 ETFDHQ16134 617 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 OR5L2Q8NGL0 311 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 IFI44Q8TCB0 444 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 ARL5BQ96KC2 179 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 AKIRIN1Q9H9L7 192 aaPredicted RBP19.38■□□□□ 0.69
CLN6-224ENST00000638076 RBMX2Q9Y388 322 aaKnown RBP19.38■□□□□ 0.69
CLN6-224ENST00000638076 ALG5Q9Y673 324 aa19.38■□□□□ 0.69
CLN6-224ENST00000638076 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 ANKRD61A6NGH8 418 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 ONECUT2O95948 504 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 TDGF1P13385 188 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 HLA-DOBP13765 273 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 CTLA4P16410 223 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 HLA-DMAP28067 261 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 SLC6A1P30531 599 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 PITPNAQ00169 270 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 RNASE12Q5GAN4 147 aaKnown RBP19.37■□□□□ 0.69
CLN6-224ENST00000638076 UBE2NLQ5JXB2 153 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 SLC35D2Q76EJ3 337 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 KLRF1Q9NZS2 232 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 V9GY05 133 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 TNRC6BQ9UPQ9 1833 aaKnown RBP19.37■□□□□ 0.69
CLN6-224ENST00000638076 SLC22A23A1A5C7 686 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 OR4C45A6NMZ5 311 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.37■□□□□ 0.69
CLN6-224ENST00000638076 MAPK3P27361 379 aaPredicted RBP19.37■□□□□ 0.69
CLN6-224ENST00000638076 ZFP69Q49AA0 526 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 STAC2Q6ZMT1 411 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 NXPE2Q96DL1 559 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 TCF7L1Q9HCS4 588 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 MRPL22Q9NWU5 206 aaKnown RBP19.37■□□□□ 0.69
CLN6-224ENST00000638076 CACNG2Q9Y698 323 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 EXPH5Q8NEV8 1989 aa19.37■□□□□ 0.69
CLN6-224ENST00000638076 IGLV1-36A0A0B4J1U3 117 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms