RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RUNX1T1Q06455 604 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 DAG1Q14118 895 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 SLC36A3Q495N2 470 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 CLEC12AQ5QGZ9 265 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 PARP8Q8N3A8 854 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 GPR137CQ8N3F9 429 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 RNASE6Q93091 150 aaKnown RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 ZNF566Q969W8 418 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 LRRC46Q96FV0 321 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 ERMAPQ96PL5 475 aaPredicted RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 RBM4BQ9BQ04 359 aaKnown RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 C9orf16Q9BUW7 83 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 RBM4Q9BWF3 364 aaKnown RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 TSSK6Q9BXA6 273 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 MRPL13Q9BYD1 178 aaKnown RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 KRT84Q9NSB2 600 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 GALNT8Q9NY28 637 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 ELOVL5Q9NYP7 299 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 GRHPRQ9UBQ7 328 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
CLN6-216ENST00000636876 TMEFF2Q9UIK5 374 aaPredicted RBP14.12□□□□□ -0.15
CLN6-216ENST00000636876 TEX13CA0A0J9YWL9 993 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 CENPBD1B2RD01 187 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 H3BN98 237 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 BHLHE40O14503 412 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 EI24O14681 340 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 IMPA2O14732 288 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 IDH3BO43837 385 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 MITFO75030 526 aaPredicted RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 TRMUO75648 421 aaKnown RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 KRT33AO76009 404 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 IGFBP5P24593 272 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 CD79BP40259 229 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 CSNK1A1P48729 337 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 PCYT1AP49585 367 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 FAPQ12884 760 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 KRR1Q13601 381 aaKnown RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 LINGO2Q7L985 606 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 ABHD12BQ7Z5M8 362 aaPredicted RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 CBR4Q8N4T8 237 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 NOXO1Q8NFA2 376 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 OR6N1Q8NGY5 312 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 TEX47Q8TBZ9 253 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 MAGEE2Q8TD90 523 aaPredicted RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 HDAC2Q92769 488 aaKnown RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 TMEM54Q969K7 222 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 RASD2Q96D21 266 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 ALKBH3Q96Q83 286 aaPredicted RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 ALG12Q9BV10 488 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 TEX15Q9BXT5 2789 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 B3GAT2Q9NPZ5 323 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 ASB6Q9NWX5 421 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 USE1Q9NZ43 259 aa14.11□□□□□ -0.15
CLN6-216ENST00000636876 ANKHD1Q8IWZ3 2542 aaKnown RBP14.11□□□□□ -0.15
CLN6-216ENST00000636876 ZNF587BE7ETH6 402 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 M0R3G1 203 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 SOCS2O14508 198 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 XKRYO14609 159 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 ALPLP05186 524 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 COX5AP20674 150 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 POU1F1P28069 291 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 GRNP28799 593 aaKnown RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 CLRN1P58418 232 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 ESRRGP62508 458 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 P2RY6Q15077 328 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 TRIP10Q15642 601 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 HIST3H3Q16695 136 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 MESTQ5EB52 335 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 PHYHD1Q5SRE7 291 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 STAC2Q6ZMT1 411 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 ZBTB49Q6ZSB9 765 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 CXorf67Q86X51 503 aaPredicted RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 LNX2Q8N448 690 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 SYT14Q8NB59 555 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 OR2T33Q8NG76 320 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 OR4Q3Q8NH05 313 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 EME1Q96AY2 570 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 KCNK17Q96T54 332 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 ULBP2Q9BZM5 246 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 RNPEPL1Q9HAU8 725 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 NPDC1Q9NQX5 325 aaPredicted RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 GLTPQ9NZD2 209 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 NKX1-2Q9UD57 310 aaPredicted RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 BAIAP2Q9UQB8 552 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 RRP15Q9Y3B9 282 aaKnown RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 KLF2Q9Y5W3 355 aaPredicted RBP14.1□□□□□ -0.15
CLN6-216ENST00000636876 CACNA1DQ01668 2161 aa14.1□□□□□ -0.15
CLN6-216ENST00000636876 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 HCFC1P51610 2035 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 RPL36A-HNRNPH2H7BZ11 118 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ARHGEF9O43307 516 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ITGA5P08648 1049 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 PSMB1P20618 241 aaKnown RBP14.09□□□□□ -0.15
CLN6-216ENST00000636876 IGHV1-2P23083 117 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 MPGP29372 298 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ALDH3A2P51648 485 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 CRISP1P54107 249 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 FOXG1P55316 489 aaPredicted RBP14.09□□□□□ -0.15
CLN6-216ENST00000636876 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms