RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LOXL2Q9Y4K0 774 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 PPP6CO00743 305 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 TPT1P13693 172 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 CSN1S1P47710 185 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 ATP4BP51164 291 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 GPR176Q14439 515 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 GAREM2Q75VX8 874 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 TMEM255BQ8WV15 326 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 LIN7BQ9HAP6 207 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 MUTYHQ9UIF7 546 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 PRAMEF25A6NGN4 478 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 UBE2G1P62253 170 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 PRAMEF5Q5TYX0 476 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 PRAMEF6Q5VXH4 476 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 SCD5Q86SK9 330 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 GCNT2Q8N0V5 402 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 LILRA2Q8N149 483 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 SLC23A1Q9UHI7 598 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 ENPP4Q9Y6X5 453 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 DNASE2O00115 360 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 ARPC3O15145 178 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 CSF1P09603 554 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 ZNF385BQ569K4 471 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 SPACA5Q96QH8 159 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 TRIB3Q96RU7 358 aa16.47■□□□□ 0.23
CACNA1A-227ENST00000636549 ZCWPW2A0A1B0GU75 182 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 UBE2NLQ5JXB2 153 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 TMEM9BQ9NQ34 198 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 BABAM2Q9NXR7 383 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 PRELID3BQ9Y3B1 194 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 MYH13Q9UKX3 1938 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 RBP4P02753 201 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 PPT1P50897 306 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 LYPD4Q6UWN0 246 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 SLC7A5P1Q8MH63 180 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 MRPS24Q96EL2 167 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 PITHD1Q9GZP4 211 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 FUOMA2VDF0 154 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 K7ESM1 405 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 LILRA3Q8N6C8 439 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 FAM157AC9JC47 383 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 K7EQM0 130 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 THBS1P07996 1170 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 NTF3P20783 257 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 TAS2R31P59538 309 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 AGAP14A8MT82 685 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 CCSO14618 274 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 ZNF816Q0VGE8 651 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 EXD3Q8N9H8 876 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 MENTQ9BUN1 341 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 BARHL1Q9BZE3 327 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 USP22Q9UPT9 525 aa16.46■□□□□ 0.23
CACNA1A-227ENST00000636549 CDK4P11802 303 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 RAB38P57729 211 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 COL19A1Q14993 1142 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 Q56UQ5 140 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 FAM43BQ6ZT52 329 aaPredicted RBP16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 ISCA2Q86U28 154 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 OR10J5Q8NHC4 309 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 TMEM59LQ9UK28 342 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 RCE1Q9Y256 329 aa16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 COA3Q9Y2R0 106 aaPredicted RBP16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 PARP4Q9UKK3 1724 aaKnown RBP16.46■□□□□ 0.22
CACNA1A-227ENST00000636549 UBCP0CG48 685 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 SMIM17P0DL12 118 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 HIST1H1TP22492 207 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 TRHRP34981 398 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 TUSC5Q8IXB3 177 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF480Q8WV37 535 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 MOB3AQ96BX8 217 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 NOX4Q9NPH5 578 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 F5H697 171 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 GALR3O60755 368 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 EGLN2Q96KS0 407 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 TSSK2Q96PF2 358 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 EPOP01588 193 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 NUDT7P0C024 238 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 SDC1P18827 310 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 MORN1Q5T089 497 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 DNAJC22Q8N4W6 341 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 OR10V1Q8NGI7 309 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 ANKRD19PQ9H560 264 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 METTL15A6NJ78 407 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 M0QZ24 198 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 OR7A17O14581 309 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 PDGFAP04085 211 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 TPMTP51580 245 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 MRPS21P82921 87 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 GAMTQ14353 236 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 THSD4Q6ZMP0 1018 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 CMBLQ96DG6 245 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 DUSP7Q16829 419 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 RAB41Q5JT25 222 aa16.45■□□□□ 0.22
CACNA1A-227ENST00000636549 OR1E3Q8WZA6 343 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms