RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ALKBH3Q96Q83 286 aaPredicted RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 GPX7Q96SL4 187 aaPredicted RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 NIPSNAP1Q9BPW8 284 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 EGLN3Q9H6Z9 239 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 B3GAT2Q9NPZ5 323 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 TBC1D23Q9NUY8 699 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ASB6Q9NWX5 421 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ELOVL5Q9NYP7 299 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 MALT1Q9UDY8 824 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 OAZ3Q9UMX2 235 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 CTAG2O75638 210 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 SOX14O95416 240 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 BAG2O95816 211 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 PCYT1AP49585 367 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 CLRN1P58418 232 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 FXYD6P3P58550 94 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 LGALS3BPQ08380 585 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 COX10Q12887 443 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 P2RY6Q15077 328 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 RFX4Q33E94 735 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 GPR139Q6DWJ6 353 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 CXorf67Q86X51 503 aaPredicted RBP12.97□□□□□ -0.33
PNKP-221ENST00000627317 GABRG1Q8N1C3 465 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 CLDN22Q8N7P3 220 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 NOXO1Q8NFA2 376 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 DNAJC9Q8WXX5 260 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 SLC25A44Q96H78 314 aaPredicted RBP12.97□□□□□ -0.33
PNKP-221ENST00000627317 ZNF570Q96NI8 536 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 TSPAN32Q96QS1 320 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 ULBP2Q9BZM5 246 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 LINC00470Q9BZP3 86 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 GRHPRQ9UBQ7 328 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 ADAM18Q9Y3Q7 739 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 ALPK2Q86TB3 2170 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 SPG11Q96JI7 2443 aa12.97□□□□□ -0.33
PNKP-221ENST00000627317 HIVEP1P15822 2718 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 A6NIZ1 184 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 H0YHG0 523 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 M0R3G1 203 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 XKRYO14609 159 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 UPK3AO75631 287 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 PPP1R3DO95685 299 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 ACADSP16219 412 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 COX5AP20674 150 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 IL32P24001 234 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 ACVR1BP36896 505 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 RAP1BP61224 184 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 RAP1AP62834 184 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 ROR2Q01974 943 aaKnown RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 CD47Q08722 323 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 FAM27E3Q08E93 113 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 KRR1Q13601 381 aaKnown RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 RCN1Q15293 331 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 FAHD1Q6P587 224 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 KLHL17Q6TDP4 642 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 CD300LDQ6UXZ3 194 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 C20orf196Q8IYI0 205 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 TEX47Q8TBZ9 253 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 FAM222BQ8WU58 562 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 KISS1RQ969F8 398 aaPredicted RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 LRR1Q96L50 414 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 Q96M85 177 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 TAS2R16Q9NYV7 291 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 ZNF346Q9UL40 294 aaKnown RBP12.96□□□□□ -0.33
PNKP-221ENST00000627317 POFUT2Q9Y2G5 429 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 IER3IP1Q9Y5U9 82 aa12.96□□□□□ -0.33
PNKP-221ENST00000627317 TEX13CA0A0J9YWL9 993 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 CIB4A0PJX0 185 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 CENPBD1B2RD01 187 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 C16orf97H3BN30 126 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 H3BN98 237 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 TRMUO75648 421 aaKnown RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 LYZL6O75951 148 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 PGA4P0DJD7 388 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 PGA3P0DJD8 388 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 NR2C1P13056 603 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 PSMB1P20618 241 aaKnown RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 IGHV1-2P23083 117 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 MPGP29372 298 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 NOS3P29474 1203 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 SDHAP31040 664 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 CCKARP32238 428 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 UGT2B10P36537 528 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 ELF3P78545 371 aaPredicted RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 TGFBR3Q03167 851 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 ITGADQ13349 1161 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 C9orf135Q5VTT2 229 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms