RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ADH6P28332 368 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 CRABP1P29762 137 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 DAP3P51398 398 aaKnown RBP19.85■□□□□ 0.77
PNKP-220ENST00000627232 RIN1Q13671 783 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 YIF1BQ5BJH7 314 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 IDNKQ5T6J7 187 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 CNIH2Q6PI25 160 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 OR13C5Q8NGS8 318 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 RNF166Q96A37 237 aaPredicted RBP19.85■□□□□ 0.77
PNKP-220ENST00000627232 TAAR9Q96RI9 348 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 DDA1Q9BW61 102 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 PTGES2Q9H7Z7 377 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 PADI1Q9ULC6 663 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 B3GALT5Q9Y2C3 310 aa19.85■□□□□ 0.77
PNKP-220ENST00000627232 ANKRD61A6NGH8 418 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 CENPBD1B2RD01 187 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 TMCC2O75069 709 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 RAB40ALP0C0E4 278 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 IL7P13232 177 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 CD59P13987 128 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 RAB3BP20337 219 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 IL11P20809 199 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 EIF1P41567 113 aaKnown RBP19.84■□□□□ 0.77
PNKP-220ENST00000627232 SSR4P51571 173 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 SFXN4Q6P4A7 337 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 C6orf15Q6UXA7 325 aaPredicted RBP19.84■□□□□ 0.77
PNKP-220ENST00000627232 YIPF7Q8N8F6 280 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 ADPRHL1Q8NDY3 354 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 OR4K17Q8NGC6 315 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 OTOSQ8NHW6 89 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 ASB10Q8WXI3 467 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 ASB17Q8WXJ9 295 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 NTNG2Q96CW9 530 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 UBL7Q96S82 380 aaPredicted RBP19.84■□□□□ 0.77
PNKP-220ENST00000627232 ZCCHC4Q9H5U6 513 aa19.84■□□□□ 0.77
PNKP-220ENST00000627232 A0A087WZY1 265 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 ZNF879B4DU55 563 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 SEC14L5O43304 696 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 SLC16A7O60669 478 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 OR8G3PP0DMU2 310 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 THBS2P35442 1172 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 TLE3Q04726 772 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 SCN1BQ07699 218 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 ALKBH1Q13686 389 aaKnown RBP19.83■□□□□ 0.77
PNKP-220ENST00000627232 BAK1Q16611 211 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 C3orf33Q6P1S2 294 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 DPY19L4Q7Z388 723 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 WDSUB1Q8N9V3 476 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 SLC25A43Q8WUT9 341 aaPredicted RBP19.83■□□□□ 0.77
PNKP-220ENST00000627232 PDCD1LG2Q9BQ51 273 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 PPP1R3EQ9H7J1 279 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 TIGARQ9NQ88 270 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 TBC1D24Q9ULP9 559 aa19.83■□□□□ 0.77
PNKP-220ENST00000627232 A0A1W2PNV4 684 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 NPIPA5E9PKD4 350 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 DLGAP3O95886 979 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 AZGP1P25311 298 aaKnown RBP19.82■□□□□ 0.76
PNKP-220ENST00000627232 MLF1P58340 268 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 NANOS3P60323 173 aaKnown RBP19.82■□□□□ 0.76
PNKP-220ENST00000627232 LIPNQ5VXI9 398 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 DNM1P34Q6PK57 102 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 IL20RBQ6UXL0 311 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 GDPD3Q7L5L3 318 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 RAB11FIP2Q7L804 512 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 RPS19BP1Q86WX3 136 aaKnown RBP19.82■□□□□ 0.76
PNKP-220ENST00000627232 NAXDQ8IW45 347 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 HTRA1Q92743 480 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 ZBTB8AQ96BR9 441 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 LIN37Q96GY3 246 aaPredicted RBP19.82■□□□□ 0.76
PNKP-220ENST00000627232 ANGPTL4Q9BY76 406 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 CDCP1Q9H5V8 836 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 FBXL2Q9UKC9 423 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 NPIPA1Q9UND3 350 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 USP34Q70CQ2 3546 aa19.82■□□□□ 0.76
PNKP-220ENST00000627232 HLA-DOBP13765 273 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 HSF1Q00613 529 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 MELKQ14680 651 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 HSD17B12Q53GQ0 312 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 PYDC2Q56P42 97 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 LRRC28Q86X40 367 aaPredicted RBP19.81■□□□□ 0.76
PNKP-220ENST00000627232 PLCZ1Q86YW0 608 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 THEM6Q8WUY1 208 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 MAP6Q96JE9 813 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 OR14A2Q96R54 314 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 ZNF160Q9HCG1 818 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 IKZF2Q9UKS7 526 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 NOTOA8MTQ0 251 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 SHISA8B8ZZ34 492 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 H3BML4 177 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 PSMD9O00233 223 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 ZNF593O00488 134 aaPredicted RBP19.81■□□□□ 0.76
PNKP-220ENST00000627232 CDX4O14627 284 aaPredicted RBP19.81■□□□□ 0.76
PNKP-220ENST00000627232 ZNF432O94892 652 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 HLA-DQA2P01906 255 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 HNRNPCP07910 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
PNKP-220ENST00000627232 CSF3P09919 207 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 ICAM2P13598 275 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 CTLA4P16410 223 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 OR10A3P58181 314 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 MYBPHQ13203 477 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms