RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 COX15Q7KZN9 410 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CENPQQ7L2Z9 268 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 LHFPL3Q86UP9 236 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CDR2LQ86X02 465 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 PSTKQ8IV42 348 aaKnown RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 TMEM61Q8N0U2 210 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 ZADH2Q8N4Q0 377 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 ARIH2OSQ8N7S6 290 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 ZNF557Q8N988 423 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 NPBQ8NG41 125 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 OR2L3Q8NG85 312 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 KCNG3Q8TAE7 436 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 FAM110BQ8TC76 370 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 RDH5Q92781 318 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CCDC126Q96EE4 140 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 MED8Q96G25 268 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 ZNF799Q96GE5 643 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 ZNF578Q96N58 590 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 RARRES2Q99969 163 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CCDC77Q9BR77 488 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 HDHD3Q9BSH5 251 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 FAM192AQ9GZU8 254 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 LINC00597Q9H2U6 94 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 SRMSQ9H3Y6 488 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 NXF3Q9H4D5 531 aaKnown RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 METTL7AQ9H8H3 244 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 DAZ3Q9NR90 486 aaKnown RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 NMRK1Q9NWW6 199 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 DEC1Q9P2X7 70 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 XCL2Q9UBD3 114 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CLCF1Q9UBD9 225 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 UXTQ9UBK9 157 aaPredicted RBP1.67□□□□□ -2.14
CHD2-203ENST00000625243 SHPKQ9UHJ6 478 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 FRMPD3Q5JV73 1810 aa1.67□□□□□ -2.14
CHD2-203ENST00000625243 CENPJQ9HC77 1338 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 CROCCQ5TZA2 2017 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 IGLV11-55A0A075B6I3 123 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 TRAV39A0A0B4J263 110 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 A0A1W2PPE3 182 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CTAGE15A4D2H0 777 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 TMX2-CTNND1H3BSU7 103 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 AP3B1O00203 1094 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 GOSR2O14653 212 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 LSM1O15116 133 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 ZNF861PO60384 105 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 SPAG7O75391 227 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CST1P01037 141 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 FGGP02679 453 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 GAPDHP04406 335 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 PCCAP05165 728 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 RETP07949 1114 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 PLEKP08567 350 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 ZDHHC11BP0C7U3 371 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 TOP1P11387 765 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 ZNF17P17021 662 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 RCC1P18754 421 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 GDI1P31150 447 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 HOXA9P31269 272 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 RPS10P46783 165 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 NPBWR2P48146 333 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 LHX2P50458 406 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CCR8P51685 355 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 RGS8P57771 180 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 VSX2P58304 361 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 GPX6P59796 221 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 YWHAGP61981 247 aaKnown RBP eCLIP1.66□□□□□ -2.14
CHD2-203ENST00000625243 RPS21P63220 83 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 HMGCS1Q01581 520 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 PAX5Q02548 391 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CKAP4Q07065 602 aaKnown RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 PPIL2Q13356 520 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 GGTLC2Q14390 218 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 TMEM183BQ1AE95 376 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 THEM4Q5T1C6 240 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 ACP7Q6ZNF0 438 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 ZNF621Q6ZSS3 439 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 RFLNAQ6ZTI6 216 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 LINC01551Q86U37 167 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CTAGE6Q86UF2 777 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CDH26Q8IXH8 852 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 TMEM183AQ8IXX5 376 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 EID2Q8N6I1 236 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 Q8N9L7 120 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 OR7G2Q8NG99 324 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 OR51G1Q8NGK1 321 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 SGK3Q96BR1 496 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 PIK3IP1Q96FE7 263 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 AURKBQ96GD4 344 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 TSSK3Q96PN8 268 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 P2RX4Q99571 388 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 SLC25A39Q9BZJ4 359 aaPredicted RBP1.66□□□□□ -2.14
CHD2-203ENST00000625243 GPR61Q9BZJ8 451 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CTPS2Q9NRF8 586 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CCL28Q9NRJ3 127 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 FAM49BQ9NUQ9 324 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 RAB26Q9ULW5 256 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 STARD10Q9Y365 291 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 GOLT1BQ9Y3E0 138 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 CARMIL3Q8ND23 1372 aa1.66□□□□□ -2.14
CHD2-203ENST00000625243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms