RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DNASE1L3Q13609 305 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 TP53I3Q53FA7 332 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ACSM3Q53FZ2 586 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 SLC18B1Q6NT16 456 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 XKRXQ6PP77 449 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 CEACAM19Q7Z692 300 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 PM20D2Q8IYS1 436 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 WDSUB1Q8N9V3 476 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 OTOSQ8NHW6 89 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ZPLD1Q8TCW7 415 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ASB10Q8WXI3 467 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 OCEL1Q9H607 264 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ABI3Q9P2A4 366 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 ZNF281Q9Y2X9 895 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 RALGAPA1Q6GYQ0 2036 aa14.71□□□□□ -0.05
LDB3-208ENST00000623007 MS4A18H0YCH9 400 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 DNPH1O43598 174 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 EIF1BO60739 113 aaKnown RBP14.71□□□□□ -0.06
LDB3-208ENST00000623007 PFDN1O60925 122 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 TMCC2O75069 709 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 VAMP5O95183 116 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 PMS2P2O95744 297 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 APOA1P02647 267 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 HRGP04196 525 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 P04436 131 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 OTX2P32243 289 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 SF3A2Q15428 464 aaKnown RBP14.71□□□□□ -0.06
LDB3-208ENST00000623007 MS4A18Q3C1V0 323 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 TEX30Q5JUR7 227 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 SLC35D2Q76EJ3 337 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 SSX6Q7RTT6 188 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 SYT14Q8NB59 555 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 OR6N2Q8NGY6 317 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 RBP7Q96R05 134 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 PRRX2Q99811 253 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 COMMD4Q9H0A8 199 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 KLHL9Q9P2J3 617 aa14.71□□□□□ -0.06
LDB3-208ENST00000623007 MRPS18CQ9Y3D5 142 aaKnown RBP14.71□□□□□ -0.06
LDB3-208ENST00000623007 SIRT4Q9Y6E7 314 aaPredicted RBP14.71□□□□□ -0.06
LDB3-208ENST00000623007 DNAH14Q0VDD8 3507 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 TEX51A0A1B0GUA7 166 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 A0A1B0GVG6 124 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 C2orf72A6NCS6 295 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 TMEM212A6NML5 194 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 C9orf172C9J069 976 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 TNFRSF10AO00220 468 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 HLA-DQA2P01906 255 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 LIFP15018 202 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 CSNK2A1P68400 391 aaPredicted RBP14.7□□□□□ -0.06
LDB3-208ENST00000623007 MYBPHQ13203 477 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 ZMAT1Q5H9K5 638 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 TIGD3Q6B0B8 471 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 FDX2Q6P4F2 183 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 UEVLDQ8IX04 471 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 ZNF511Q8NB15 262 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 POC1BQ8TC44 478 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 ARL5BQ96KC2 179 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 CMTM3Q96MX0 182 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 PIGQQ9BRB3 760 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.7□□□□□ -0.06
LDB3-208ENST00000623007 COPS3Q9UNS2 423 aa14.7□□□□□ -0.06
LDB3-208ENST00000623007 IGLV1-36A0A0B4J1U3 117 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 FABP12A6NFH5 140 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 C17orf51A8MQB3 221 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 E9PI62 339 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 TLX3O43711 291 aaPredicted RBP14.69□□□□□ -0.06
LDB3-208ENST00000623007 SLC16A7O60669 478 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 ZNF254O75437 659 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 KHDRBS3O75525 346 aaKnown RBP14.69□□□□□ -0.06
LDB3-208ENST00000623007 RAF1P04049 648 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 UCHL1P09936 223 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 IMPDH2P12268 514 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 DPP4P27487 766 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 PSMD7P51665 324 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 CCR9P51686 369 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 CDC20Q12834 499 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 CCDC157Q569K6 752 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 THEM4Q5T1C6 240 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 BICRALQ6AI39 1079 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 DEGS2Q6QHC5 323 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 UNQ9370/PRO34162Q6UXP9 181 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 TIPARPQ7Z3E1 657 aaKnown RBP14.69□□□□□ -0.06
LDB3-208ENST00000623007 LYSMD2Q8IV50 215 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 YIPF7Q8N8F6 280 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 MIB2Q96AX9 1013 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 DIRAS2Q96HU8 199 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 OXGR1Q96P68 337 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 NAA11Q9BSU3 229 aaPredicted RBP14.69□□□□□ -0.06
LDB3-208ENST00000623007 SLITRK2Q9H156 845 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 TSPAN10Q9H1Z9 355 aaPredicted RBP14.69□□□□□ -0.06
LDB3-208ENST00000623007 ACOXLQ9NUZ1 547 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 KCNG2Q9UJ96 466 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 RASD1Q9Y272 281 aa14.69□□□□□ -0.06
LDB3-208ENST00000623007 H3BML4 177 aa14.68□□□□□ -0.06
LDB3-208ENST00000623007 LINC01387J3KSC0 135 aa14.68□□□□□ -0.06
LDB3-208ENST00000623007 AQP8O94778 261 aa14.68□□□□□ -0.06
LDB3-208ENST00000623007 PLGP00747 810 aaPredicted RBP14.68□□□□□ -0.06
LDB3-208ENST00000623007 ZNF823P16415 610 aa14.68□□□□□ -0.06
LDB3-208ENST00000623007 RAB3BP20337 219 aa14.68□□□□□ -0.06
LDB3-208ENST00000623007 TALDO1P37837 337 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms