RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	GSN-AS1	Q9NRJ2	163 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	HAO2	Q9NYQ3	351 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	MYEF2	Q9P2K5	600 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	MDC1	Q14676	2089 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	SNRNP200	O75643	2136 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF749	O43361	778 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	SNAPC5	O75971	98 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	GLS	O94925	669 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	NDUFB2	O95178	105 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	RPS15A	P62244	130 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	C12orf76	Q8N812	135 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR14C36	Q8NHC7	312 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	COMMD9	Q9P000	198 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	FAM96B	Q9Y3D0	163 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	ATG2B	Q96BY7	2078 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	DOCK9	Q9BZ29	2069 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	PQLC2L	A1A4F0	135 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	URAD	A6NGE7	173 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	ANXA2	P07355	339 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	AKR1C3	P42330	323 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	LY6G6F	Q5SQ64	297 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	STAC2	Q6ZMT1	411 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	SYS1	Q8N2H4	156 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR51D1	Q8NGF3	324 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	MIB2	Q96AX9	1013 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	SERGEF	Q9UGK8	458 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	NOP16	Q9Y3C1	178 aa	Known RBP	13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	USP34	Q70CQ2	3546 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	XIRP2	A4UGR9	3374 aa		13.12	□□□□□ -0.31
SYNRG-231	ENST00000622045	SULT1B1	O43704	296 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	SSX5	O60225	188 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ACTL6A	O96019	429 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR8G3P	P0DMU2	310 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF10	P21506	573 aa	Predicted RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	RORA	P35398	523 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	DRD3	P35462	400 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	CST6	Q15828	149 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	SCGB2B2	Q4G0G5	96 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	DND1	Q8IYX4	353 aa	Known RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	UTP23	Q9BRU9	249 aa	Known RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	TIMM29	Q9BSF4	260 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	DAPP1	Q9UN19	280 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF281	Q9Y2X9	895 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	DENND4A	Q7Z401	1863 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	C5orf42	Q9H799	3197 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	C4orf47	A7E2U8	309 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	RAB40AL	P0C0E4	278 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	H2AFB1	P0C5Y9	115 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	HTRA4	P83105	476 aa	Predicted RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZAR1	Q86SH2	424 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	EID2	Q8N6I1	236 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	POMGNT2	Q8NAT1	580 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZSCAN1	Q8NBB4	408 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	RAB40A	Q8WXH6	277 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	C3orf49	Q96BT1	292 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045		Q96M85	177 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	SERINC2	Q96SA4	455 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ULBP3	Q9BZM4	244 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	FARSA	Q9Y285	508 aa	Known RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	NOTCH4	Q99466	2003 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	PRR32	B1ATL7	298 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045		H7C417	338 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	CEACAM5	P06731	702 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	GAS6	Q14393	721 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	OTP	Q5XKR4	325 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF425	Q6IV72	752 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	CAMKV	Q8NCB2	501 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR1J2	Q8NGS2	313 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZPLD1	Q8TCW7	415 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	SMARCD2	Q92925	531 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZMAT3	Q9HA38	289 aa	Known RBP	13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	MTFP1	Q9UDX5	166 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045	TBX21	Q9UL17	535 aa		13.11	□□□□□ -0.31
SYNRG-231	ENST00000622045		A0A0D9SG52	128 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GPR89A	B7ZAQ6	455 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GPRIN2	O60269	458 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR10H2	O60403	315 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	RAD1	O60671	282 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	OR4E1	P0C645	316 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GPR89B	P0CG08	455 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	HAAO	P46952	286 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	ATP1B3	P54709	279 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GLT8D1	Q68CQ7	371 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	FAM117A	Q9C073	453 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TRPV4	Q9HBA0	871 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	DUSP22	Q9NRW4	184 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	FLRT3	Q9NZU0	649 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	IKZF2	Q9UKS7	526 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TTLL8	A6PVC2	850 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GRXCR1	A8MXD5	290 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	MCIDAS	D6RGH6	385 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	TXNL1	O43396	289 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	USP53	Q70EK8	1073 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	RNF44	Q7L0R7	432 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	FAM220A	Q7Z4H9	259 aa		13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.1	□□□□□ -0.31
SYNRG-231	ENST00000622045	ZNF511	Q8NB15	262 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms