RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 C4orf46Q504U0 113 aa7□□□□□ -1.29
NEK3-207ENST00000617054 VASH1Q7L8A9 365 aaPredicted RBP7□□□□□ -1.29
NEK3-207ENST00000617054 VASH2Q86V25 355 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PLCZ1Q86YW0 608 aa7□□□□□ -1.29
NEK3-207ENST00000617054 UBQLNLQ8IYU4 475 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ARIH2OSQ8N7S6 290 aa7□□□□□ -1.29
NEK3-207ENST00000617054 KBTBD8Q8NFY9 601 aa7□□□□□ -1.29
NEK3-207ENST00000617054 OR52N1Q8NH53 320 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ST8SIA1Q92185 356 aa7□□□□□ -1.29
NEK3-207ENST00000617054 GHSRQ92847 366 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PPP1R14AQ96A00 147 aa7□□□□□ -1.29
NEK3-207ENST00000617054 ADAD1Q96M93 576 aaKnown RBP7□□□□□ -1.29
NEK3-207ENST00000617054 C12orf10Q9HB07 376 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PLGRKTQ9HBL7 147 aa7□□□□□ -1.29
NEK3-207ENST00000617054 DEPPQ9NTK1 212 aa7□□□□□ -1.29
NEK3-207ENST00000617054 PINLYPA6NC86 204 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ZNF670-ZNF695F2Z2N8 137 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CASKO14936 926 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 TRIM3O75382 744 aaPredicted RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 MT-ND5P03915 603 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ITGA3P26006 1051 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CALRP27797 417 aaKnown RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 GABRA5P31644 462 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 OR2B6P58173 313 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 RPL27P61353 136 aaKnown RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 TUBA1BP68363 451 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CAMK2DQ13557 499 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 TBC1D25Q3MII6 688 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 TUBA1AQ71U36 451 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 RDH10Q8IZV5 341 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 EXD3Q8N9H8 876 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 OR1J4Q8NGS1 313 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 OIT3Q8WWZ8 545 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 DDIT4LQ96D03 193 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 BCL7BQ9BQE9 202 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 DDA1Q9BW61 102 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 AKIP1Q9NQ31 210 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 SDHAF3Q9NRP4 125 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 KCNG2Q9UJ96 466 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 COA3Q9Y2R0 106 aaPredicted RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 PRSS37A4D1T9 235 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 LIPT2A6NK58 231 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 PRSS47A8MTI9 375 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CLDN25C9JDP6 229 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ZIC3O60481 467 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 TRAPPC6AO75865 159 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 BPNT1O95861 308 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 WNT11O96014 354 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 PRKAR1AP10644 381 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ENDOUP21128 410 aaKnown RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 GRNP28799 593 aaKnown RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 STARP49675 285 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 SH3BGRP55822 239 aaPredicted RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 GABREP78334 506 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 C11orf91Q3C1V1 193 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 ZMAT1Q5H9K5 638 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CORO6Q6QEF8 472 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 H1FNTQ75WM6 255 aaPredicted RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 NR2C2APQ86WQ0 139 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 LAX1Q8IWV1 398 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 MFSD4AQ8N468 514 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 NEIL3Q8TAT5 605 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 RNF138Q8WVD3 245 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 THAP4Q8WY91 577 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 KCTD7Q96MP8 289 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 SIGLEC12Q96PQ1 595 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 CCNL2Q96S94 520 aaPredicted RBP6.99□□□□□ -1.29
NEK3-207ENST00000617054 PTGES2Q9H7Z7 377 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 TRIM36Q9NQ86 728 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 HAO2Q9NYQ3 351 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 PIEZO2Q9H5I5 2752 aa6.99□□□□□ -1.29
NEK3-207ENST00000617054 A0A1B0GVC2 190 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 A6NIN4 97 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 VSTM5A8MXK1 200 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PRR33A8MZF0 331 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TNFRSF10AO00220 468 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 OR2T1O43869 369 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 RENP00797 406 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 MT-ATP6P00846 226 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 OR2T7P0C7T2 308 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 HTR3AP46098 478 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PSMD7P51665 324 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 BIDP55957 195 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 OR10A3P58181 314 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 LGALS3BPQ08380 585 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TMEM225Q6GV28 225 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 FAM83FQ8NEG4 500 aaPredicted RBP6.98□□□□□ -1.29
NEK3-207ENST00000617054 OR2T27Q8NH04 317 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 STK35Q8TDR2 534 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 PAQR8Q8TEZ7 354 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SH3GL3Q99963 347 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 ZPBPQ9BS86 351 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 IKZF2Q9UKS7 526 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 TRBV2A0A0J9YWF9 115 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 SLC22A23A1A5C7 686 aa6.98□□□□□ -1.29
NEK3-207ENST00000617054 STMND1H3BQB6 276 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms