RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ZNF705AQ6ZN79 300 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 Q6ZPB1 254 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 C15orf54Q8N8G6 183 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 ZNF439Q8NDP4 499 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 DMBX1Q8NFW5 382 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 CT45A3Q8NHU0 189 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 KCNJ15Q99712 375 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 GLIPR2Q9H4G4 154 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 SLC39A9Q9NUM3 307 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 HSPB2A8KAH6 182 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 BHLHE40O14503 412 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 ACHEP22303 614 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 BLVRBP30043 206 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 HOXA1P49639 335 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 GABREP78334 506 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 BAXQ07812 192 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 HSPB2Q16082 182 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 GLYR1Q49A26 553 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 OR4A16Q8NH70 328 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 ABHD6Q9BV23 337 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 GABARAPL1Q9H0R8 117 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 PIGMQ9H3S5 423 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 SHC1P29353 583 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 CNEP1R1Q8N9A8 125 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 FER1L6-AS2Q96M78 137 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 FBXL4Q9UKA2 621 aa16.08■□□□□ 0.16
HMGXB3-206ENST00000613459 TNFRSF10CO14798 259 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 NDUFA6P56556 154 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 LGI3Q8N145 548 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 OR51A2Q8NGJ7 313 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 OR1S2Q8NGQ3 325 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 UQCC2Q9BRT2 126 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 A0A1W2PPH5 198 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 ADPRMQ3LIE5 342 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 PAN3Q58A45 887 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 ABHD17CQ6PCB6 329 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 PRSS35Q8N3Z0 413 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 LKAAEAR1Q8TD35 194 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 OR1E3Q8WZA6 343 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 THAP10Q9P2Z0 257 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 TMEM127O75204 238 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 F11P03951 625 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 NAT1P18440 290 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 EXT1Q16394 746 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 C1QTNF12Q5T7M4 302 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 PNPLA1Q8N8W4 532 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 SLC22A12Q96S37 553 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 PATZ1Q9HBE1 687 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 HIF1ANQ9NWT6 349 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 KPTNQ9Y664 436 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 GABARAPH6UMI1 98 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 RAF1P04049 648 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 GABRA2P47869 451 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 SEMA3BQ13214 749 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 IHHQ14623 411 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 FAM78AQ5JUQ0 283 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 FAM3DQ96BQ1 224 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 OR11A1Q9GZK7 315 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 MOB1AQ9H8S9 216 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 OR52A1Q9UKL2 312 aa16.07■□□□□ 0.16
HMGXB3-206ENST00000613459 PPP1R2P9O14990 202 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 DEFB103AP81534 67 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 KDM8Q8N371 416 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 OR52H1Q8NGJ2 320 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 DUSP22Q9NRW4 184 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 OR14J1Q9UGF5 321 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 TCRBV5S1A1TA0A578 114 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 NKX6-3A6NJ46 265 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ZBTB42B2RXF5 422 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 WNT11O96014 354 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 THBS1P07996 1170 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 CRMP1Q14194 572 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 XKR7Q5GH72 579 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 FAM199XQ6PEV8 388 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 LYSMD1Q96S90 227 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 SELENOIQ9C0D9 397 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 SNX11Q9Y5W9 270 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ZNF587BE7ETH6 402 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 APEX1P27695 318 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ZNF93P35789 620 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 EMC4Q5J8M3 183 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 GJC3Q8NFK1 279 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ALX3O95076 343 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 CTXN2P0C2S0 81 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 AADACP22760 399 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 OXA1LQ15070 435 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ZMAT1Q5H9K5 638 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 ESPNLQ6ZVH7 1005 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 MED25Q71SY5 747 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 NAXDQ8IW45 347 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 KIRREL1Q96J84 757 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 RNF170Q96K19 258 aa16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 GPR55Q9Y2T6 319 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-206ENST00000613459 C1QBP02746 253 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms