RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SLC35A1P78382 337 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 NHLH1Q02575 133 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 TPBGQ13641 420 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SPCS2Q15005 226 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 TOMM20Q15388 145 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SSX1Q16384 188 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 LINC01590Q5TEZ4 76 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 FAM205BPQ63HN1 556 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF322Q6U7Q0 402 aaPredicted RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 LINC00696Q6ZRV3 163 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 TMPPEQ6ZT21 453 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ATCAYQ86WG3 371 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 PHC2Q8IXK0 858 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 KDM8Q8N371 416 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 TMEM99Q8N816 258 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 OR51L1Q8NGJ5 315 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 OR6K6Q8NGW6 343 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ZNRF4Q8WWF5 429 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 MIB2Q96AX9 1013 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 C5orf34Q96MH7 638 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SIGLEC12Q96PQ1 595 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 DCUN1D5Q9BTE7 237 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ALG12Q9BV10 488 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SRA1Q9HD15 236 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 NDUFB11Q9NX14 153 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 VSX1Q9NZR4 365 aaPredicted RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 NOX1Q9Y5S8 564 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PQL4 384 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 GJE1A6NN92 205 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 NPIPA5E9PKD4 350 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 H7C1C5 153 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 HLA-DOBP13765 273 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF182P17025 639 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 PAX7P23759 505 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 PSMA1P25786 263 aaKnown RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SHC1P29353 583 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SFTPDP35247 375 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 CD79BP40259 229 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 CENPAP49450 140 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 GPR85P60893 370 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 NCS1P62166 190 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 LCN6P62502 163 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 HSF1Q00613 529 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 BDH1Q02338 343 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 C19orf57Q0VDD7 668 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 FOXO1Q12778 655 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 EEF1A1P5Q5VTE0 462 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 LIPKQ5VXJ0 399 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 GDPGP1Q6ZNW5 385 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SLC35F2Q8IXU6 374 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 PM20D2Q8IYS1 436 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 OR6V1Q8N148 313 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 OR2M7Q8NG81 312 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 OR14L1PQ8NHC6 308 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SPRYD4Q8WW59 207 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 KCNE4Q8WWG9 221 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 TM9SF4Q92544 642 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 UFD1Q92890 307 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 RPL3LQ92901 407 aaKnown RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 TSSK2Q96PF2 358 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 MYCBPQ99417 103 aaPredicted RBP7.98□□□□□ -1.13
CCDC47-207ENST00000612558 TBX5Q99593 518 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 TIMP4Q99727 224 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 NUAK2Q9H093 628 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 OR51E2Q9H255 320 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 SYT4Q9H2B2 425 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 BABAM2Q9NXR7 383 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 PLA2G3Q9NZ20 509 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 NPIPA1Q9UND3 350 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 FKBP7Q9Y680 259 aa7.98□□□□□ -1.13
CCDC47-207ENST00000612558 LOC100506127A0A0U1RQW1 187 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 LOC102725191A0A1B0GVB3 256 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SLC22A23A1A5C7 686 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 PINLYPA6NC86 204 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 OR5H15A6NDH6 313 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TRABD2BA6NFA1 517 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 A6NL46 340 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 AQP7P3A6NL99 342 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 FAM171A2A8MVW0 826 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 LINC01387J3KSC0 135 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 DCTN6O00399 190 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 AHCYL1O43865 530 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 EIF1BO60739 113 aaKnown RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TRAPPC6AO75865 159 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TFP02787 698 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MT-ND5P03915 603 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 PRKAR1AP10644 381 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 IFNGR1P15260 489 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 GDF1P27539 372 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 PYCR1P32322 319 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 UGT2B10P36537 528 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NAA10P41227 235 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 P2RY4P51582 365 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 BLVRAP53004 296 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms